KEGG   Melampsora larici-populina: MELLADRAFT_44871
Entry
MELLADRAFT_44871  CDS       T03138                                 
Name
(RefSeq) hypothetical protein
  KO
K12830  splicing factor 3B subunit 3
Organism
mlr  Melampsora larici-populina
Pathway
mlr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mlr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MELLADRAFT_44871
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mlr03021]
    MELLADRAFT_44871
   03041 Spliceosome [BR:mlr03041]
    MELLADRAFT_44871
   03036 Chromosome and associated proteins [BR:mlr03036]
    MELLADRAFT_44871
Transcription machinery [BR:mlr03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     MELLADRAFT_44871
Spliceosome [BR:mlr03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    MELLADRAFT_44871
 Complex B
    MELLADRAFT_44871
 Complex C
   U2 SnRNP specific factors
    MELLADRAFT_44871
Chromosome and associated proteins [BR:mlr03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    STAGA complex
     MELLADRAFT_44871
    TFTC complex
     MELLADRAFT_44871
SSDB
Motif
Pfam: Beta-prop_RSE1_1st CPSF_A Beta-prop_RSE1_2nd Beta-prop_BBS7
Other DBs
NCBI-GeneID: 18928205
NCBI-ProteinID: XP_007414305
JGI: Mellp1_44871
UniProt: F4RYW5
LinkDB
Position
Unknown
AA seq 1210 aa
MHLYNLTLLPPSAITCATVGSFSGTRQQDICICRGGTRLELLRPDASTGKMNSVISSDAF
GTIRSLTSFRLTGGTKDYIILGSDSGRIVVLEFDPVLNAFVKVHQETYGKSGARRVVPGQ
YLATDPKGRAVMVAAMEKSKLVYILNRDSAANLTISSPLEAHKSNAIIHHIVGVDVGFEN
PLFAALEVDYGESDQDHTGEAFNSAEKMLTYYELDLGLNHVVRKWSEPTEPRANMLLQVP
GGQSATHADKFDGPSGVLVCCEDMIIYKHQNVKEHRVPIPKRNTPFNDVERGVIIVAAVM
HKMRGAFFFLVQTEEGDLFKVTIDHEDEEVQALKIKYFDTVPVSSSLTILKSGFLFVAAE
MGNHYLYQFEKLGDDDDETEFSSEQYPDNGCSDEPLPKAFFKPRPLQNLVLSDELESLAP
IIDAKAANLLNTDSPQILTSCGRGSRSSLRILRHGLDVSEIVTSDLPGPPTNVWTTKLND
DDLFDRYIILGFLNATLVLSIGETIVEVSDTGFLTNSPTISIQQLDKNGLLQIHPTGIRH
IHLNGGVTEWKVPAGRKIVVSTSNQRQVVVGLSGGELIYFELDLEGQLNEYQEQKEMGST
ITTLSLSEVPKGRQRTPFLAIGLENLTVQIISLDPNSVLETISLQALTSVPSSICIAELL
DSSIDKNNETLFVNIGLSNGVLLRTVLDSVNGQLTDTRTRFLGSRPVKLLRVKVDSKTSV
IALSSRTWLNYTYQNMLQFNPLIYDSIDNVHSFSAELCPEGLIGIVGSSLRIFTIPKLGI
KVKQDSMPLSYTPRKMILDPVTKHVITIESEHRTMSPSVKAERLAEHKAQGLEFDEHIFN
DEVLGLPRSEPGQWASCIRISDPLEKTTLTKIELENNEAATSAAIVSFANQDLQGPLLVV
GTAKDAFVQPRTCRNGYLSVFKFTDNGKGLELLHKTEVDDIPTAIIGFQGRLAAGIGKAL
RIFDLGKKKLLRKVENKTFSAAISSLSTQGPRLLVGDAQDSISYAVYKPAENRLLVFADD
ISPRWTTCATMVDYDTCAGGDRFGNVWVNRIPKTVSDEVDDDPTGAGIMHEKGYLMGAPH
KVKNLVHFHLNDIPTSMEKTSLVPGGREVLLYTGLQGTVGILIPFLSKEDVDFFQTLEMH
MRSELPSLVGRDHLAYRGYYFPVKNCVDGDMCESFALLPMSKQQQVAAELDRSVSDVLKK
IEAVRVSSGY
NT seq 3633 nt   +upstreamnt  +downstreamnt
atgcatctttataatctcacactcttgccaccgtccgccatcacctgcgctactgtcggt
tcattctcagggactcgccagcaggacatatgtatctgtcgaggtggcacccgactggaa
cttctcaggccggatgcctccactggaaagatgaattcggtgatctcttctgatgcattc
gggacgatacggtcgctcacgtctttcaggctaaccggaggcaccaaagattacattatt
cttggatcggattctggaaggattgtcgtgttggagttcgatccggtgttgaacgcgttt
gtaaaagttcatcaagaaacatacggaaagtctggcgcacgaagagtcgtaccaggacaa
tatttggccacggatccaaaaggtcgagctgtgatggttgccgccatggagaaaagtaaa
ttggtgtacatcctgaaccgagattctgctgcaaatttaactatctcatctcctctggaa
gcacacaagtccaacgctatcattcatcacattgtgggggtcgacgtcggattcgaaaac
cctctctttgctgcacttgaggtggactatggcgaatcagatcaggatcacacaggcgaa
gccttcaattcagctgaaaagatgttgacttactacgaactcgatctaggcctgaatcac
gtggtccggaagtggtccgagcccacagagcctcgggcaaacatgttattgcaagttcca
ggtggacagagcgctacacacgctgataagtttgatggaccctccggggtgctggtatgt
tgcgaggatatgatcatctacaagcaccagaatgtgaaagagcacagagtgccgattccc
aaacggaacacccctttcaatgacgtagaacgaggtgttatcattgtggccgcagtgatg
cacaaaatgcggggggcctttttcttcctcgtgcaaaccgaagaaggggatctattcaaa
gtcacaattgatcatgaagacgaagaagtacaagctttgaagatcaagtatttcgataca
gttcccgtttcttcaagcctcacaatcctcaagtccgggttcttgtttgttgctgccgaa
atgggcaaccactatctttatcagtttgaaaaattgggcgatgacgatgacgaaaccgag
ttttcgtcggagcagtatcccgacaatggttgcagcgatgaaccactacccaaggctttc
ttcaaacctcgcccactacagaatttggtcttgtcggatgaattggaatccctggcacca
atcatcgatgctaaagctgcaaatcttttaaacacagactctcctcaaatcttgaccagc
tgtgggaggggctctcgcagctctcttcgaatattaaggcatggcttagacgtgtctgag
attgttacatcagatcttcctggaccccccaccaacgtatggactaccaaattgaacgat
gacgatcttttcgaccgttatataattttgggcttcttgaacgccacccttgtgttgtcg
attggtgaaacaatcgtagaggtctctgatacgggcttcctgaccaactcccccacgatc
tccattcaacaattggacaagaatggcctattacaaattcatcccacgggaattcgtcat
atccatttgaatgggggggtcacagaatggaaagtccccgcgggacgtaaaattgttgtg
tccacttcaaatcaaagacaggtcgtagtgggattaagtggaggcgagctgatctacttc
gaattagatctggagggtcaattgaatgagtatcaagagcaaaaggagatgggctctacc
atcacaacactgtctttatctgaagtgccgaagggtcgacaacgaactccatttttggcc
attggactcgagaacctgaccgtccagatcatttcacttgacccgaattcggttctggaa
accatcagtttacaagccttgacctcggtccctagttcaatttgtatcgccgagctattg
gactcatcgattgacaagaataatgagacactatttgtcaacatcggtctgtcaaatgga
gtgcttttacgaactgtactagattccgttaacggtcaactcacggatactcgtactagg
ttcctaggctctcggcctgtcaagcttttgagagtcaaggtcgattcaaagaccagtgtg
attgcactctcttcgcgcacgtggctgaactatacgtatcagaatatgttacaattcaat
cctttgatttacgactctatcgacaacgtccacagctttagcgctgagctgtgtccagaa
gggttgattggtattgtgggaagctctttgcgcattttcactatccccaaattggggatc
aaagtcaagcaggattcgatgcctctttcttacaccccccgcaagatgatcttggatcct
gtcaccaagcacgttatcaccatcgaatctgaacaccgaaccatgtcgcccagcgtcaag
gcggagcggcttgctgaacataaagcgcaagggttggagtttgacgagcacatcttcaat
gacgaagtgcttggactgccaaggagcgaacctggacaatgggcatcttgcatcaggatc
agcgatcccttggagaaaactaccttgacgaagatagagttggagaataacgaagctgct
acttccgcggccattgtctcgttcgccaatcaggacttgcaagggccactcttagttgta
gggacagcaaaagatgcatttgtgcagccgcgtacttgtcgaaacggatatctcagcgtg
ttcaagtttacggacaatgggaagggcttagaattgttacacaagacggaggtcgatgat
atccctactgctatcattggcttccaaggacgccttgcagctggtatcggtaaagcattg
cggatatttgatctgggaaagaagaagctccttcgcaaagtcgaaaacaaaaccttttca
gccgcaatatcatccctatcaacccagggtccgcgattgttagttggtgatgcacaagat
agcatatcctacgcggtttacaagcctgcagaaaatcgtttgcttgtttttgcagatgat
atctctccacgttggaccacgtgtgcaacaatggtagactacgatacttgtgctggagga
gacaggtttggaaacgtgtgggtcaaccggataccaaagactgtatcagatgaagttgat
gacgaccccactggggcaggtattatgcatgagaagggttatttgatgggtgctccgcat
aaagtcaagaatttggttcattttcacctcaacgatatccctacctcgatggaaaaaact
tctctggtacctggtggtcgtgaagtcttgctctacaccgggctacagggcacagtcgga
attcttataccgttcttgtcaaaagaagacgtagacttcttccagacgctcgaaatgcac
atgcggtcagaactacccagtctggttggtcgagatcatctagcttaccgggggtattac
ttcccggtcaaaaactgcgtagacggtgatatgtgtgaatcttttgcgctactacccatg
tccaaacaacaacaggtcgcggcagagctggatcgtagtgtttcagatgttctgaagaag
attgaggctgtgagggtttcaagcggatattga

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