Melampsora larici-populina: MELLADRAFT_44871
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Entry
MELLADRAFT_44871 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K12830
splicing factor 3B subunit 3
Organism
mlr
Melampsora larici-populina
Pathway
mlr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MELLADRAFT_44871
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mlr03021
]
MELLADRAFT_44871
03041 Spliceosome [BR:
mlr03041
]
MELLADRAFT_44871
03036 Chromosome and associated proteins [BR:
mlr03036
]
MELLADRAFT_44871
Transcription machinery [BR:
mlr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
MELLADRAFT_44871
Spliceosome [BR:
mlr03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
MELLADRAFT_44871
Complex B
MELLADRAFT_44871
Complex C
U2 SnRNP specific factors
MELLADRAFT_44871
Chromosome and associated proteins [BR:
mlr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
MELLADRAFT_44871
TFTC complex
MELLADRAFT_44871
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
18928205
NCBI-ProteinID:
XP_007414305
JGI:
Mellp1_44871
UniProt:
F4RYW5
LinkDB
All DBs
Position
Unknown
AA seq
1210 aa
AA seq
DB search
MHLYNLTLLPPSAITCATVGSFSGTRQQDICICRGGTRLELLRPDASTGKMNSVISSDAF
GTIRSLTSFRLTGGTKDYIILGSDSGRIVVLEFDPVLNAFVKVHQETYGKSGARRVVPGQ
YLATDPKGRAVMVAAMEKSKLVYILNRDSAANLTISSPLEAHKSNAIIHHIVGVDVGFEN
PLFAALEVDYGESDQDHTGEAFNSAEKMLTYYELDLGLNHVVRKWSEPTEPRANMLLQVP
GGQSATHADKFDGPSGVLVCCEDMIIYKHQNVKEHRVPIPKRNTPFNDVERGVIIVAAVM
HKMRGAFFFLVQTEEGDLFKVTIDHEDEEVQALKIKYFDTVPVSSSLTILKSGFLFVAAE
MGNHYLYQFEKLGDDDDETEFSSEQYPDNGCSDEPLPKAFFKPRPLQNLVLSDELESLAP
IIDAKAANLLNTDSPQILTSCGRGSRSSLRILRHGLDVSEIVTSDLPGPPTNVWTTKLND
DDLFDRYIILGFLNATLVLSIGETIVEVSDTGFLTNSPTISIQQLDKNGLLQIHPTGIRH
IHLNGGVTEWKVPAGRKIVVSTSNQRQVVVGLSGGELIYFELDLEGQLNEYQEQKEMGST
ITTLSLSEVPKGRQRTPFLAIGLENLTVQIISLDPNSVLETISLQALTSVPSSICIAELL
DSSIDKNNETLFVNIGLSNGVLLRTVLDSVNGQLTDTRTRFLGSRPVKLLRVKVDSKTSV
IALSSRTWLNYTYQNMLQFNPLIYDSIDNVHSFSAELCPEGLIGIVGSSLRIFTIPKLGI
KVKQDSMPLSYTPRKMILDPVTKHVITIESEHRTMSPSVKAERLAEHKAQGLEFDEHIFN
DEVLGLPRSEPGQWASCIRISDPLEKTTLTKIELENNEAATSAAIVSFANQDLQGPLLVV
GTAKDAFVQPRTCRNGYLSVFKFTDNGKGLELLHKTEVDDIPTAIIGFQGRLAAGIGKAL
RIFDLGKKKLLRKVENKTFSAAISSLSTQGPRLLVGDAQDSISYAVYKPAENRLLVFADD
ISPRWTTCATMVDYDTCAGGDRFGNVWVNRIPKTVSDEVDDDPTGAGIMHEKGYLMGAPH
KVKNLVHFHLNDIPTSMEKTSLVPGGREVLLYTGLQGTVGILIPFLSKEDVDFFQTLEMH
MRSELPSLVGRDHLAYRGYYFPVKNCVDGDMCESFALLPMSKQQQVAAELDRSVSDVLKK
IEAVRVSSGY
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atgcatctttataatctcacactcttgccaccgtccgccatcacctgcgctactgtcggt
tcattctcagggactcgccagcaggacatatgtatctgtcgaggtggcacccgactggaa
cttctcaggccggatgcctccactggaaagatgaattcggtgatctcttctgatgcattc
gggacgatacggtcgctcacgtctttcaggctaaccggaggcaccaaagattacattatt
cttggatcggattctggaaggattgtcgtgttggagttcgatccggtgttgaacgcgttt
gtaaaagttcatcaagaaacatacggaaagtctggcgcacgaagagtcgtaccaggacaa
tatttggccacggatccaaaaggtcgagctgtgatggttgccgccatggagaaaagtaaa
ttggtgtacatcctgaaccgagattctgctgcaaatttaactatctcatctcctctggaa
gcacacaagtccaacgctatcattcatcacattgtgggggtcgacgtcggattcgaaaac
cctctctttgctgcacttgaggtggactatggcgaatcagatcaggatcacacaggcgaa
gccttcaattcagctgaaaagatgttgacttactacgaactcgatctaggcctgaatcac
gtggtccggaagtggtccgagcccacagagcctcgggcaaacatgttattgcaagttcca
ggtggacagagcgctacacacgctgataagtttgatggaccctccggggtgctggtatgt
tgcgaggatatgatcatctacaagcaccagaatgtgaaagagcacagagtgccgattccc
aaacggaacacccctttcaatgacgtagaacgaggtgttatcattgtggccgcagtgatg
cacaaaatgcggggggcctttttcttcctcgtgcaaaccgaagaaggggatctattcaaa
gtcacaattgatcatgaagacgaagaagtacaagctttgaagatcaagtatttcgataca
gttcccgtttcttcaagcctcacaatcctcaagtccgggttcttgtttgttgctgccgaa
atgggcaaccactatctttatcagtttgaaaaattgggcgatgacgatgacgaaaccgag
ttttcgtcggagcagtatcccgacaatggttgcagcgatgaaccactacccaaggctttc
ttcaaacctcgcccactacagaatttggtcttgtcggatgaattggaatccctggcacca
atcatcgatgctaaagctgcaaatcttttaaacacagactctcctcaaatcttgaccagc
tgtgggaggggctctcgcagctctcttcgaatattaaggcatggcttagacgtgtctgag
attgttacatcagatcttcctggaccccccaccaacgtatggactaccaaattgaacgat
gacgatcttttcgaccgttatataattttgggcttcttgaacgccacccttgtgttgtcg
attggtgaaacaatcgtagaggtctctgatacgggcttcctgaccaactcccccacgatc
tccattcaacaattggacaagaatggcctattacaaattcatcccacgggaattcgtcat
atccatttgaatgggggggtcacagaatggaaagtccccgcgggacgtaaaattgttgtg
tccacttcaaatcaaagacaggtcgtagtgggattaagtggaggcgagctgatctacttc
gaattagatctggagggtcaattgaatgagtatcaagagcaaaaggagatgggctctacc
atcacaacactgtctttatctgaagtgccgaagggtcgacaacgaactccatttttggcc
attggactcgagaacctgaccgtccagatcatttcacttgacccgaattcggttctggaa
accatcagtttacaagccttgacctcggtccctagttcaatttgtatcgccgagctattg
gactcatcgattgacaagaataatgagacactatttgtcaacatcggtctgtcaaatgga
gtgcttttacgaactgtactagattccgttaacggtcaactcacggatactcgtactagg
ttcctaggctctcggcctgtcaagcttttgagagtcaaggtcgattcaaagaccagtgtg
attgcactctcttcgcgcacgtggctgaactatacgtatcagaatatgttacaattcaat
cctttgatttacgactctatcgacaacgtccacagctttagcgctgagctgtgtccagaa
gggttgattggtattgtgggaagctctttgcgcattttcactatccccaaattggggatc
aaagtcaagcaggattcgatgcctctttcttacaccccccgcaagatgatcttggatcct
gtcaccaagcacgttatcaccatcgaatctgaacaccgaaccatgtcgcccagcgtcaag
gcggagcggcttgctgaacataaagcgcaagggttggagtttgacgagcacatcttcaat
gacgaagtgcttggactgccaaggagcgaacctggacaatgggcatcttgcatcaggatc
agcgatcccttggagaaaactaccttgacgaagatagagttggagaataacgaagctgct
acttccgcggccattgtctcgttcgccaatcaggacttgcaagggccactcttagttgta
gggacagcaaaagatgcatttgtgcagccgcgtacttgtcgaaacggatatctcagcgtg
ttcaagtttacggacaatgggaagggcttagaattgttacacaagacggaggtcgatgat
atccctactgctatcattggcttccaaggacgccttgcagctggtatcggtaaagcattg
cggatatttgatctgggaaagaagaagctccttcgcaaagtcgaaaacaaaaccttttca
gccgcaatatcatccctatcaacccagggtccgcgattgttagttggtgatgcacaagat
agcatatcctacgcggtttacaagcctgcagaaaatcgtttgcttgtttttgcagatgat
atctctccacgttggaccacgtgtgcaacaatggtagactacgatacttgtgctggagga
gacaggtttggaaacgtgtgggtcaaccggataccaaagactgtatcagatgaagttgat
gacgaccccactggggcaggtattatgcatgagaagggttatttgatgggtgctccgcat
aaagtcaagaatttggttcattttcacctcaacgatatccctacctcgatggaaaaaact
tctctggtacctggtggtcgtgaagtcttgctctacaccgggctacagggcacagtcgga
attcttataccgttcttgtcaaaagaagacgtagacttcttccagacgctcgaaatgcac
atgcggtcagaactacccagtctggttggtcgagatcatctagcttaccgggggtattac
ttcccggtcaaaaactgcgtagacggtgatatgtgtgaatcttttgcgctactacccatg
tccaaacaacaacaggtcgcggcagagctggatcgtagtgtttcagatgttctgaagaag
attgaggctgtgagggtttcaagcggatattga
DBGET
integrated database retrieval system