Melampsora larici-populina: MELLADRAFT_45592
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Entry
MELLADRAFT_45592 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
mlr
Melampsora larici-populina
Pathway
mlr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MELLADRAFT_45592
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlr03019
]
MELLADRAFT_45592
Messenger RNA biogenesis [BR:
mlr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
MELLADRAFT_45592
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
MELLADRAFT_45592
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
SHOCT-like_DUF2089-C
DUF1192
Motif
Other DBs
NCBI-GeneID:
18928257
NCBI-ProteinID:
XP_007416732
JGI:
Mellp1_45592
UniProt:
F4S5Y3
LinkDB
All DBs
Position
Unknown
AA seq
621 aa
AA seq
DB search
MALRKLQADIDRVLKLVQQGVTAFEETFDKMTHATNQTSKDKAEADLKTSIKKLQRQRDQ
IKTWLQSNDIKDKSCLMDHRKLIETQMERFKACEKEMKTKAFSKEGLSAQQKLDPKEVAK
MEMSHWVSTMVDELGQQIERTEAEVELLRSQTKKKKATGTDGRGPELEALNDRRRWHIGK
LELIMRLLENGQISPERVGEVKDDIQYYVESNTEEDFTEDDDLYESLNLQEEEEQFGMHD
DLLSSHDTSSIIEDGNSTTVKLDLTGANRRPSGKGHADDSGEKSPSKEKMPLATGQLLRG
PTVRKATLESAAAPRATPAALPSLRYASAAAAAAASPAANGGPSNGPSIASPEAQKSLPL
TSSQEASAQSTPSDSDHSPDIQDSNSNSQISNAGISSTSIVLNPSGHSTQSAQSTQSVGG
AASNQEVERSPSPSSSSATNRGENSDQQQHRHMSSDHKHVSSLADLVETFESLKAHEPSM
MEMHSILDSGLSSIPQIEDAEKPSYYAPRNPYPTSSHYPQQPMAFEKRPAIWGEIEVEVL
FYLFYYHQGGYLQYLAAKELKKRAWRFHKYYLTWFQRAKNPEEMADDYEKGSYTYFDWEA
DWLMRTKTPFQFDYKHLEDSL
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggccctgcgaaagctacaggccgatatcgatcgcgtgctcaaactggttcaacaaggt
gtcactgccttcgaagagacctttgacaagatgacgcatgctaccaaccagacttctaaa
gacaaagcagaagccgacctcaaaacttctatcaagaagcttcagcgacagagagaccag
ataaagacctggcttcagagtaacgacatcaaagacaagtcgtgccttatggatcatcgt
aaactgatagagactcaaatggaacgtttcaaagcttgcgaaaaagagatgaagacaaaa
gctttcagcaaggaaggtcttagcgcccagcagaaactggatccgaaagaggtggccaag
atggaaatgagccattgggtctcaacaatggtagatgagctaggccaacagattgagcgg
acagaagccgaggtcgaactgctacgaagtcagacgaagaagaagaaggcaactgggact
gacggtcgggggcctgaattggaagctctcaatgatcgtcggcgatggcacattggcaag
ctggaattgattatgcgacttttggaaaacggtcagatctcacccgaacgagtaggcgaa
gtcaaggatgacattcaatactatgttgaatccaacactgaagaagacttcactgaggat
gatgatctttatgagtctcttaacctacaagaagaagaagagcaattcggcatgcatgat
gatctcctgtcttcacacgacacgagttcaataattgaggacggcaattcgacaacggtc
aagcttgaccttacaggggccaatcgcaggccaagcggcaaagggcacgctgacgactcc
ggggaaaagagtcccagcaaagagaaaatgcctctcgccaccggtcagctacttcgtgga
ccaactgtcagaaaggctacccttgaatctgcagccgcaccccgagctacaccagctgct
ctcccgtctttgcgctacgcgagtgcggcagcggcagcagcagcgtctcccgctgcgaac
ggcggaccctcaaatggcccatcgatcgcctcacctgaagcacagaagtcgctgccgctt
acgtcctctcaagaggcaagtgcacaatccaccccatcggattctgaccactctccggat
attcaagattccaactcgaactcacagatatccaatgctgggatcagcagcacctcaata
gttttgaacccatctggacattcaactcagtctgcgcagtcaactcaatcggtcgggggc
gccgcttccaatcaagaagttgaacgttcccctagtccatccagctcctctgccacaaac
cggggcgaaaactcagatcaacagcaacatcgccacatgtcctccgatcacaaacatgtt
tcgtctttagcagatctggtagagacctttgaaagcttgaaagctcacgagcccagcatg
atggaaatgcattcgatcttagactctggcctctcgagcattcctcaaattgaggatgct
gagaaaccaagttattatgctccccgtaacccatatccgacaagctcacattatcctcag
caaccgatggcttttgaaaaacgacctgcgatctggggtgaaatcgaagttgaagtattg
ttctacctcttctactatcatcaaggagggtatctacagtacttggcagctaaggagctt
aaaaagcgtgcgtggagatttcacaagtactatctcacttggtttcagcgggccaagaac
ccagaggagatggcagatgattatgagaaagggtcttacacgtattttgactgggaggct
gactggctgatgaggacgaaaacgccgtttcagtttgattacaagcatctggaagactca
ctctga
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