Melampsora larici-populina: MELLADRAFT_45784
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Entry
MELLADRAFT_45784 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
mlr
Melampsora larici-populina
Pathway
mlr03013
Nucleocytoplasmic transport
mlr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
MELLADRAFT_45784
03015 mRNA surveillance pathway
MELLADRAFT_45784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlr03019
]
MELLADRAFT_45784
Enzymes [BR:
mlr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MELLADRAFT_45784
Messenger RNA biogenesis [BR:
mlr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
MELLADRAFT_45784
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
18928273
NCBI-ProteinID:
XP_007417488
JGI:
Mellp1_45784
UniProt:
F4S801
LinkDB
All DBs
Position
Unknown
AA seq
516 aa
AA seq
DB search
MSDVNEVENLLASRLSALDPNAAEENTSVLNSMGLKPEDTKPDSKPKTGLPISQPTASPE
SPKAEKFPQDDPVAEITQSKASQLLQNLSHQVEIKLADQQADPNSPLYSAQSFEDLKLRP
ELLKGLYRMGFQRPSKIQERALPLLLQDPPRNMIGQSQSGTGKTAAFVLTMLSRVDPSRK
VPQAICVCPSRELARQILDVADQMGQYLEGVTKCLASKDTLVRGERIEAQVIVGTPGTIK
DALTTHRISGTREPVIDPSGIKVLVADEADVLVGTGSLGEQCIGVKNAIGRQSSSAQIIL
FSATFPDHVRKYASKFAPNANEIKLKKEELTLEGIKQFYMDCNDREHKYTVLVELYQLLT
IGQSIIFAQERRTADEIARRMNADGHKVAVLHGAQVGEGRDQTIDDFREGRSKVLITTNV
VARGIDISQVNLVVNYDLPRDPMKGGADAETYLHRIGRTGRFGRKGISINFIHDQNSYQD
MMKIKSDLEISDEQLVKVDTKDFDDMEKTLKAAIKA
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgtcaacgaggtcgaaaacctactggcttcccgtctctcagctctcgaccct
aatgcagctgaggagaatacctccgttctgaactcgatgggtctaaaaccagaagacacc
aaacccgactctaagccgaaaactggattgcccatctctcaacccactgcttcgcctgag
tcaccaaaagcagaaaaatttcctcaagatgatccggtagcagaaatcactcaatcaaaa
gcctcacagctcttacaaaacctatcacatcaagtcgagatcaaacttgcggaccaacaa
gctgatcctaattcaccactctattccgctcaatcattcgaagatctcaaattgaggcct
gaactgttgaaaggactctatcgaatgggctttcaacgtccttcaaagattcaagagagg
gccttgccattactacttcaagacccacctcgtaatatgattggtcaatctcaatctggt
acaggaaagactgctgcgtttgtcctgacgatgctatcacgagtagacccgagtaggaaa
gtccctcaagcaatttgtgtttgtccatcgcgtgaattggcgcgacagattttggatgta
gcagatcagatgggtcaatatctagaaggtgtgaccaagtgtttggcttcgaaagatacc
ctcgtaaggggtgaaaggatcgaagcccaggtcattgtggggacacctgggacaatcaag
gatgctctcactacccatagaatcagtgggacaagagaaccagtgattgacccaagtggg
atcaaagtcttggtagcagatgaagcagatgtattggtgggtactggttcactaggtgaa
cagtgtatcggggtcaaaaatgcgatcggacgacaaagttcatcagctcaaatcatcctt
ttctcagcaacattcccagatcatgtgaggaaatatgcatcgaaatttgctcctaatgcc
aacgagattaaattgaagaaggaagaattaaccctagaaggcattaaacaattctacatg
gattgtaacgatagggaacataagtacacagtattagtagagctctatcaactattgact
ataggtcaatcgatcatctttgcccaagaaagacgaacggcagatgagattgcacgtagg
atgaatgctgatggtcacaaggttgccgtactacatggagctcaagttggagaaggaaga
gatcagacaattgatgactttagagaaggtagaagtaaagtattgattaccaccaatgtg
gttgctagaggaattgatatctctcaagttaacttggtagttaattacgatttgccaagg
gatccgatgaaaggaggggccgatgctgaaacttacttacataggatcggtaggactgga
aggtttggacgaaaaggaatttcgattaattttattcatgatcaaaatagttatcaagat
atgatgaagattaaatccgatttagagatatcagacgaacagttggtgaaggtagacact
aaagattttgatgatatggaaaaaacattgaaagcggccatcaaagcatga
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