Melampsora larici-populina: MELLADRAFT_46164
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Entry
MELLADRAFT_46164 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
mlr
Melampsora larici-populina
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mlr03041
]
MELLADRAFT_46164
03009 Ribosome biogenesis [BR:
mlr03009
]
MELLADRAFT_46164
Enzymes [BR:
mlr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MELLADRAFT_46164
Spliceosome [BR:
mlr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
MELLADRAFT_46164
Ribosome biogenesis [BR:
mlr03009
]
Eukaryotic type
90S particles
Helicases
MELLADRAFT_46164
Pre-60S particles
MELLADRAFT_46164
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
18928311
NCBI-ProteinID:
XP_007418872
JGI:
Mellp1_46164
UniProt:
F4SBX0
LinkDB
All DBs
Position
Unknown
AA seq
659 aa
AA seq
DB search
MSLTEQGTSKPSDSTAAKKKRKRSTKTGTSAKSSETPATSTGSQKATKTKAPAKPVVELL
EPEIEGAYLDACENSDGDDNKSGKHKRKQKNGKRKDNADEGSPATAGPDLTTFAESSASA
SDKPLVTEFTSLNLSPGTAKAIEEMGFKHMTEVQARTIPPLMTGRDVLGAARTGSGKTLA
FLVPAVEMLSRLQFKPRNGTGAIIVSPTRELALQIFGVAQELMKHHSQTFAITIGGANRK
AEAEKLIKGVNLLISTPGRLLDHLQNTKGFVFSNLKALIIDEADRILEIGFEDEMRKIIS
LLPSENRQSMLFSATQTTKVQDLARISLRPGPLYINVDANKQDATVQGLEQGYVVCESEK
RFLLLFTFLKKSLNKKVIVFFSSCNSVKYHGELLNYIDIPALDLHGKQKQQKRTNTFFEF
CNAPTGILLCTDVAARGLDIPKVDWIIQFDPPDDPRDYIHRVGRTARAGKSGRSLLFLLP
SELGFLRFLKLAKVPLNEYSFPTDKLANVQTQLTKLISKNYYLNQSARDGFRSYIQSYAS
YSLKKIFNVNSLDLNKVGQAFGFTVPPAVNIPISALKNSDKKRLKTSESHDPEQDVEDKS
NGDWTSDEEDEDNQGPRKRPTVRRESNTNRRKEQFGSKAVAKDHFRSENLKTKDKQWSR
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttactgaacaaggtacttcaaaaccatcagactctactgcagcaaagaagaaa
cggaaaaggtcaacgaaaactggcacctctgccaaatcctctgagactcctgccacatcg
accggatcacagaaggcgacaaaaacaaaggcgcctgcaaagccagtcgttgaactgcta
gaaccagaaattgagggagcttatttagatgcctgtgaaaactccgacggcgatgataac
aaaagtggaaagcacaagcgaaaacaaaagaacggcaaacggaaagacaacgccgatgaa
ggatctcccgccacggctggacctgacctcacgacgtttgcagagtcatctgcttcagcc
tcggacaaaccgcttgtgaccgaattcacatccttgaacttgtctcccggaacagcgaag
gctatagaagagatgggattcaagcatatgaccgaagtccaagctagaaccataccaccc
ttgatgactggtcgagacgtacttggtgcagcccggacaggaagcggaaaaactttggca
tttctggtccccgcggtagaaatgctcagcaggctacagttcaaaccccgtaacggaacc
ggtgctataatcgtgtctccaaccagagagctggcacttcaaatttttggtgtggctcaa
gaactcatgaaacaccatagtcaaacatttgcaattaccattggcggagcgaatcgaaag
gcagaagctgagaagttgatcaaaggtgtcaacctgctgataagtacgcccggtcgcttg
ctggatcacttgcaaaatacgaagggctttgtgttctcgaatctgaaagccctcatcatt
gacgaagctgatcggattctcgaaatcggattcgaggatgaaatgcgcaaaatcatctca
cttctgccatctgaaaaccgtcaatccatgctcttctccgccacacagacaaccaaagtc
caagacctcgcacgtatctcacttcgtccaggacccctttacatcaacgtggatgccaac
aagcaggatgccactgttcaaggcttagaacaaggctatgtagtttgtgaaagcgagaaa
cgatttttgttgttgttcacctttttgaaaaagagcctgaataagaaagttattgttttc
ttttcaagctgtaactcagtcaagtaccatggggaactcctcaattacatcgatatacct
gccttggaccttcacggcaagcaaaagcagcagaaacgtaccaacacctttttcgaattc
tgtaatgcgccaacgggaattttactttgcacagatgtggctgctcgaggtttagatata
ccaaaggtggattggatcatacaatttgacccaccagatgatccgagggattacatccac
cgggtcggtcgaacagctagggcaggcaaatcgggtcgaagtcttctattcctgttgcct
agcgaacttggattccttcgcttcttgaagttggcaaaagtgcctttgaacgagtacagt
ttccccaccgataaactggcaaatgtacaaacacaattaacaaagctcatctccaagaat
tattacttgaatcagtcagctcgggatggattccgatcatatatccaatcttacgcctct
tacagtctcaagaaaattttcaatgtcaatagccttgatctcaacaaagtgggccaagca
tttggttttactgttcctccggctgtcaacatccccatctcggcacttaaaaattccgac
aaaaaacgtttaaaaacatctgagagtcacgaccctgagcaggacgtggaggacaagtca
aatggcgattggacgagcgatgaagaggatgaagataatcaaggtcctcgaaaacgacct
accgttcgaagagagagcaatacaaaccgacgcaaggaacaatttgggagcaaagctgtg
gctaaggaccatttccgctcagaaaacttgaagaccaaagataagcaatggagtcgatga
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