Melampsora larici-populina: MELLADRAFT_47409
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Entry
MELLADRAFT_47409 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K10755
replication factor C subunit 2/4
Organism
mlr
Melampsora larici-populina
Pathway
mlr03030
DNA replication
mlr03410
Base excision repair
mlr03420
Nucleotide excision repair
mlr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MELLADRAFT_47409
03410 Base excision repair
MELLADRAFT_47409
03420 Nucleotide excision repair
MELLADRAFT_47409
03430 Mismatch repair
MELLADRAFT_47409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mlr03032
]
MELLADRAFT_47409
03036 Chromosome and associated proteins [BR:
mlr03036
]
MELLADRAFT_47409
03400 DNA repair and recombination proteins [BR:
mlr03400
]
MELLADRAFT_47409
DNA replication proteins [BR:
mlr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
MELLADRAFT_47409
DNA Replication Termination Factors
ELG1-RFC complex
MELLADRAFT_47409
Chromosome and associated proteins [BR:
mlr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
MELLADRAFT_47409
DNA repair and recombination proteins [BR:
mlr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
MELLADRAFT_47409
Check point factors
HRAD17(Rad24)-RFC complex
MELLADRAFT_47409
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Rep_fac_C
DNA_pol3_delta2
RCF1-5-like_lid
AAA_lid_RFC1
AAA_22
AAA_assoc_2
RuvB_N
Rad17
AAA_11
AAA_16
Mg_chelatase
AAA_5
AAA_14
AAA_2
AAA_24
SLFN-g3_helicase
Gp44_lid
AAA_28
DEAD
AAA_7
ResIII
AAA_30
AAA_19
DUF815
AAA_18
AAA_3
DUF3659
RNA_helicase
nSTAND3
AAA_25
Motif
Other DBs
NCBI-GeneID:
18928431
NCBI-ProteinID:
XP_007406890
JGI:
Mellp1_47409
UniProt:
F4RD48
LinkDB
All DBs
Position
Unknown
AA seq
382 aa
AA seq
DB search
MNAFEAMKAGASSRKMAEAPSNPTVLPSALPWVEKYRPKNIESVEGQDATTRVLAKTLHR
ADLPHMLFYGPPGTGKTSTILALARELFGPELMKSRVLELNASDERGISVVRDKIKSFAK
VSISPATNAYPCPPFKIIILDEADSMTQDAQSALRRIMENYSKITRFCLICNYVTRIIEP
IVSRCSKFRFTPLSSTDTLSRLNEICRLENVKVAEPVLASLIKVSDGDLRRSITFLQSAS
KLRNGSSADDEAGEITQEDVEEIGGVIPDTEIRKLMKTMGIDVEADGDVTMADGNTRGKT
RQTPFEKIAEAVELLMRQGYSSVQLISQLHDLILLDTLIPPRCKTMISIALGETDKRLND
GAEEELQVLSLCLKIWKAMQSS
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgttcgaggcaatgaaagcgggcgcaagctctcggaaaatggcggaggcaccc
tctaatcctactgtcttaccatccgccttaccatgggtcgaaaaatatcgacctaagaac
atcgaaagcgtagagggtcaagatgcgacgacgcgtgtgttggccaaaaccttgcatcga
gctgatttaccacacatgctattttacggtccacctgggaccggtaagacttccaccata
ttggcactcgcgcgcgaacttttcggacctgaattgatgaaatcgcgtgtcctggaatta
aatgcttctgacgagcggggaatttcagtcgtaagagataagattaagagttttgctaag
gtttcaatcagcccggccacaaacgcttatccatgtccgcctttcaaaatcatcattctt
gacgaggcagactcaatgactcaggatgcacagtcagctctccgacgtatcatggagaat
tactcgaagatcactcggttctgtctcatttgtaactatgtaacacgaatcattgagcca
attgtatcgagatgtagcaagtttcgattcacccctttatcttctacagataccctatcg
aggttaaacgagatctgcaggttggaaaatgtgaaagtcgcggagcccgtattggcatca
ctcatcaaagtctctgatggtgatttgcgacgatcaattaccttccttcagtcggcatcc
aaattaaggaatggaagctctgcagatgatgaagcgggtgagattactcaggaagatgtg
gaagagataggaggcgtcattccggatactgagatccgcaagctcatgaagacaatggga
atagacgttgaggctgatggtgatgtgacaatggctgatggaaatactcggggcaagaca
cgacagacgccatttgaaaaaattgctgaagcagtggagctgctcatgcgtcaaggatat
agctcagtacagctaataagccaattgcatgatttaatactgctggatacactcatccca
ccccgatgtaagactatgatttccatcgctcttggtgaaacggataagcgactaaatgac
ggagctgaagaagagctgcaagtactatctctatgtctgaaaatctggaaagcaatgcag
tcgtcatga
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integrated database retrieval system
