Melampsora larici-populina: MELLADRAFT_49117
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Entry
MELLADRAFT_49117 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
mlr
Melampsora larici-populina
Pathway
mlr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
MELLADRAFT_49117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mlr03009
]
MELLADRAFT_49117
Ribosome biogenesis [BR:
mlr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
MELLADRAFT_49117
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP15_C
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_EML
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_SPT8
Frtz
Beta-prop_WDR19_1st
WD40_like
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
WD40_RFWD3
KNTC1_N
NBCH_WD40
Beta-prop_DCAF12
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_Nup120_160
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
18928582
NCBI-ProteinID:
XP_007412338
JGI:
Mellp1_49117
UniProt:
F4RSU0
LinkDB
All DBs
Position
Unknown
AA seq
517 aa
AA seq
DB search
MEFLKLKPDTHPRLTRSDAERSESKYWRDFKNPVFVKSYAPISHITFSSKSPHRFCISSG
TKIQIYSPKTLRVVKTISRFQLPVRFSDIKSDGKLIVSSDDSGLIQVFDLNSRAILRSFQ
DHKQPVHVVRFSPSSSSILTCSDDSTVRLFDLATSKIMRTFMGHSDYVRAGNFMAPNLVI
SGGYDGKMNLWDDRINENNGLVWTLDHEEPIENILIHPSGTLGVSAGGPVARVWDLLGGS
GNKQNLVSLSNHQKTITSLSWAIGPCNGDDDLRNPTRRLLSGGLDGLVKVYDLSTGSYKV
RHTIRYSSPILSMGVSPDDGTLVVGCTDGSLSIRKRHQKKVEALRLKAAKEKQSSIGMTL
SGAAGSETVWDRQDTHLMEEMARAGLDIWDRMLKSFRYGDALDSVLTPSTPPNITFALCR
ELIHRDGLHQALSGRDEVSLAPILRFLTKYITDPRWFNIGSDVMKCIMELYESVLGKSDI
IDSLFNKLWHRVTDEVKLHSKLFEINGQIEMILANFD
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggaattcttaaaacttaaaccagatactcatcctcgtctaacacgttctgatgctgaa
aggtccgaaagtaaatattggagagactttaagaatccagtcttcgttaaatcatatgca
ccaatctcacatatcactttttcatctaaatcgccgcatagattttgtataagttcagga
acgaagattcaaatttattcacccaaaacattaagagtagtcaaaacgatttcaagattt
caattaccagttagattttcagatatcaaatcagatggaaaacttattgtttcttctgat
gattctggtttaattcaagtctttgatttgaattctcgtgcaatcttacgttcatttcaa
gatcataaacaacctgttcatgtcgttaggttttctccaagttcttcttcaatcttaact
tgttcagatgattcgaccgtacggcttttcgatttagctacctctaaaatcatgagaact
tttatgggtcattcagattatgttagagcgggtaattttatggcacctaatttggtgatt
tcaggtggttatgatggtaagatgaatttatgggatgataggataaatgaaaacaatggt
ttggtttggactcttgatcatgaagaacctattgaaaacattttgattcatcctagtggt
acattaggtgtttcagctggtggaccggtggctagagtttgggatcttttaggtggaagt
ggtaataaacagaatctcgtcagtcttagtaatcatcaaaaaacaatcactagtttgagt
tgggctatcggtccttgtaatggtgatgatgatcttcgaaatcctactaggcggcttttg
tcaggtggtttggatggattagtcaaagtttatgatctttcgactgggtcttacaaagtt
cgacataccattcgatatagctctccaatcttatcgatgggtgtttctcctgatgatgga
acactcgtagtaggatgtacagatggtagtctaagtattcgaaaacgacatcagaaaaaa
gtggaagctctacgtcttaaagctgctaaggaaaaacaatcatcaataggaatgacgttg
agtggagcagctggatctgaaactgtatgggatagacaggatactcatttgatggaagaa
atggctcgagcaggattggatatttgggatcggatgttgaaatcattcagatatggtgat
gctctcgattctgtcttgactccttcaacccctcctaacatcacctttgctctatgtcgg
gaactaattcatcgagatggactacatcaagctctttccggaagagatgaagttagctta
gctccaatcttacgtttcttaacaaaatatatcaccgatcctcgatggtttaatattgga
tctgatgtaatgaaatgtatcatggaactttatgaatcagttttaggtaaatcagatatc
atcgatagtttatttaataaactttggcatagggttacagatgaagttaaattacattcg
aaactgtttgaaattaatggtcaaatcgaaatgattttagctaattttgattga
DBGET
integrated database retrieval system