Melampsora larici-populina: MELLADRAFT_49323
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Entry
MELLADRAFT_49323 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K14962
COMPASS component SWD2
Organism
mlr
Melampsora larici-populina
Pathway
mlr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MELLADRAFT_49323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlr03019
]
MELLADRAFT_49323
03036 Chromosome and associated proteins [BR:
mlr03036
]
MELLADRAFT_49323
Messenger RNA biogenesis [BR:
mlr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
MELLADRAFT_49323
Chromosome and associated proteins [BR:
mlr03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
MELLADRAFT_49323
COMPASS/SET1 complex (yeast)
MELLADRAFT_49323
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_SPT8
WD40_RFWD3
WD_LRWD1
Beta-prop_EIPR1
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
18928601
NCBI-ProteinID:
XP_007412794
JGI:
Mellp1_49323
UniProt:
F4RUG4
LinkDB
All DBs
Position
Unknown
AA seq
391 aa
AA seq
DB search
MNASTSSSAMSLNSSNPTKVLLTPEVMCNLKISKVFRGHNTGCRPFTSLSFDDKGEHLIT
TGEDETLQLFGARNGKHLKQAFSKKYGCCLARFTHKSSAVIHASTKEDDTVRYLSLHDNT
YIRYLKGHKRRVVSLEMSPRDDTVLSGSFDDTVRLWDLRSPSCQGVLNIAGQPCVAFDPS
GLVFAVALNMKQTILLYDLRQFDSEPFVARHIQDPTLSRQMYPPAQPPPFTSLKFSNDGS
KLLVGTAGDIHYLLDAFTGDILARLEGHQGLEATMNEMEAKGPIASSQETSWTPDSRYVF
SGSADGKIVVWDVQPPKDDPIHATRSPQGPHTTWQPLKTYEGHLGKNPARCVSFNPRLGM
LATAGNELAFWLPGNSLDDRDEPEEVDSMQS
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgtctacctcttcaagtgccatgtctttgaactcaagtaatcccaccaaagtc
cttttgacacccgaagtgatgtgtaatttgaaaatatcaaaagtctttcgtggtcataat
acgggatgtcgtccatttacttctttatcttttgatgataaaggtgaacatttgatcacg
actggtgaagatgaaactcttcaactctttggtgctaggaatggaaaacatttgaaacaa
gccttttctaagaaatacggttgttgtctggcgcgatttactcataaatcttcagctgtc
attcacgcgtctaccaaggaagatgacacagtgcgatacctttctttacatgataatact
tacatcagatacctaaagggacacaagcgcagagtagtatcacttgagatgtcgccacgt
gacgataccgttttatctggttccttcgatgatactgttaggttatgggatttgagatca
ccttcttgtcagggtgtactcaatatagctggccaaccgtgtgtagcatttgatccttct
ggattggtatttgctgttgcattgaacatgaagcaaaccatcttactatacgatctgcgg
caattcgattctgagccgtttgtagcaagacatatccaagaccctaccctttcgagacag
atgtacccacccgctcaaccacctcctttcacttccctaaaattttccaatgatgggtct
aagttattggttggcacagcgggtgatatacattatctgttggatgcattcaccggtgac
attctagcacgtcttgaaggtcaccaagggctagaagctacaatgaatgagatggaagca
aagggtccgatagcttcttcacaagaaacaagttggacaccggatagtcgatacgtattc
tcaggtagcgctgacggtaagatcgttgtatgggatgttcaacctccaaaagatgatcca
attcacgccacaagatcaccgcaaggacctcatacaacatggcaaccattgaaaacttat
gaaggacatttgggtaagaatccagccagatgtgtttcttttaatcctcgattgggtatg
ttggcaactgctggtaacgagttggcattttggctacctggtaattcattggatgatcgt
gatgaaccagaggaagttgatagcatgcaatcatag
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