Melampsora larici-populina: MELLADRAFT_49933
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Entry
MELLADRAFT_49933 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
mlr
Melampsora larici-populina
Pathway
mlr03440
Homologous recombination
mlr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MELLADRAFT_49933
03450 Non-homologous end-joining
MELLADRAFT_49933
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mlr03032
]
MELLADRAFT_49933
03400 DNA repair and recombination proteins [BR:
mlr03400
]
MELLADRAFT_49933
DNA replication proteins [BR:
mlr03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
MELLADRAFT_49933
DNA repair and recombination proteins [BR:
mlr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
MELLADRAFT_49933
BRCA1-C complex
MELLADRAFT_49933
NHEJ (non-homologous end-joining)
MRX complex
MELLADRAFT_49933
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
AAA_15
AAA_21
SbcC_Walker_B
AAA_29
ABC_tran
AAA_13
Thiolase_C_1
AAA_16
Motif
Other DBs
NCBI-GeneID:
18928651
NCBI-ProteinID:
XP_007414731
JGI:
Mellp1_49933
UniProt:
F4S037
LinkDB
All DBs
Position
Unknown
AA seq
1303 aa
AA seq
DB search
MSTIDKIAIRGIRSFDHEQMAVMQFYSPLTVIVGHNGSGKTTIIECLKYITTGDLPPNAK
GGAFVHDPSMAGESTVMAEVMLRFRNAAGTKLVASRRLQVSKKKTAGITMKTLEGTLSYN
DDGREGSSAKRRTISTKCAEMDIELPRQLGISKAILENVIFCHQEESNWPLSEPASLKKK
FDEIFEATKYTKALDNLKLIKKEATADLKVDKERYSALATDKARAEKLQAGIDKIKANIE
KKEERYDDLDAQIAGLAEDNKKFYEQAVHYKEILNEYETLSRQKDNREEMVQDLLEGMEE
IAATDEDLRNSREESRAKLENHAERLQDTKDQLASLELEIAKLRRRHQNKFTELGQLKAQ
TQRHVSALEERQDLVRHLSEHHQIKGFEGPIDERQVEEFLNTLTESQKRCSSELEQVKPK
KRSKKRSLNTRRRKARIDKRNKLCRNKLCDTTRKRVRKLTEQIERVKISEHDLKDQTDSL
KQKQDRLTELTKWMTQSQADNRIKTKNDEIKKLEDEKDELHSELSGLHRQFDTRAKLALK
RTDAKKKNDGIHTIIESHGPKFKELVKTEMTLENAETDIGNALRDIERQSRDTESVNATA
ARNLQTVDTKLQMNKAKTKSLERELYGLEKKIKDAADGETVSQSISIAETEILSLNSELD
IIKYSVRFHQNLLAKAKKGNNCGACQREFGDAQEMQRFERFVSSILENESFKKLTSIYQS
ELKEWQEQLERMKNLLPDELAVNKLRETELPSLEEELKELESKWAASSHTSEDARRDVER
LKDQMSELMLCKRSVIDMTRMRLEADDLEREIQRLEFELENSGSTKTSEVVEAQLEALTT
KLAEVRKEVNSLVTERDNKRASIQVLENQIHQIELDLNNKRQQIKEREGFEKQKEESRTE
IAQLDEMIKKIDEHIRTFAEPISRLENELKELSARNSGAELEVVKKVQMYNKSLNQIETI
NREIAKFVESGIETSMQRCQGEIDRLEQLIKQATQMLAESQQTLIDLDQESTKAKEFERN
ISDNIRLRAHRDEIAGLESALQELDVEGAREANRKYDEEYHKARKLQADFQADHARLGGE
IGMDRKNLKDKKSEMDVEFKDIFNRHRNQLIKVKTVEIANQDLDKYAKALDQAIMKYHSH
KMAEINDTIQTLWQKTYQGTDIDKILIKSENENAKSNRSYNYRVVMLKDQVEMDMRGRCS
AGQKVLASIIIRLALAESFGTNCGILALDEPTTNLDKDNINALANALSEIIKERRDQANF
QLVVITHDEDFLNQLGQSDVLDKYWRVSRNTQQKSIIERQRLM
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccatcgacaagatcgccattcgtggcatccgtagttttgatcatgagcaaatg
gcagtcatgcaattctacagtccgttgactgtcatcgttggtcacaatggaagtggcaag
acaactatcatcgaatgcttgaaatacatcactactggcgatctaccgcccaacgccaaa
ggaggtgcctttgtgcatgatccatctatggctggtgaatctactgtgatggcagaagtc
atgctacgtttccgaaatgcagctggtacaaagttagtcgccagtcgacgtctccaagtc
agcaagaaaaagactgctgggatcaccatgaaaactcttgaagggaccctatcgtacaat
gatgatggccgtgagggatctagtgcaaagagacggacaatatcgaccaaatgtgccgag
atggatatagaacttcctcgacaacttggaatatcaaaagccatcctggaaaatgtaatc
ttttgtcatcaagaggagagtaattggccattgtctgaacccgccagtctaaagaaaaaa
tttgatgagattttcgaggcaaccaaatataccaaagcgcttgataacctcaagctcatc
aaaaaggaagcaacggcggacctgaaagtcgacaaggagagatattccgccttggcaact
gataaggctcgtgcagaaaagctgcaagcaggtatagataagatcaaggcaaatatcgag
aagaaagaggaacgttatgacgatttggatgctcaaatcgctggtcttgccgaggataac
aagaaattttacgagcaagctgtacactataaggaaattttgaatgagtacgaaactttg
tcacgacagaaagataatcgcgaagagatggtacaggatctgttggagggcatggaagaa
attgcagccacggatgaagacttgaggaattctcgagaagaatctagagctaagttggaa
aaccatgcagagagattgcaagataccaaagatcaattagccagtcttgaattagaaata
gccaagctgcgacgaagacaccaaaataagtttaccgagttaggtcagttgaaagctcaa
actcagcgacacgtatctgcattagaagaaaggcaggacttggtaaggcatctaagtgaa
catcatcaaattaaaggctttgaaggcccgatcgatgaaaggcaagtcgaagagttctta
aacacactcaccgagtctcagaagagatgttcctctgaactggagcaagtgaaaccgaag
aaaagaagcaaaaagagatctttgaacacaagacggaggaaggctcgaatcgacaaaaga
aacaagctttgcaggaacaaactgtgcgacaccacccggaagcgcgtcaggaaattgact
gagcaaattgagagggtcaagatctctgaacatgatctcaaagatcaaaccgatagttta
aagcaaaaacaggatcgtttgacagaattgacgaaatggatgactcaatcccaagctgac
aaccggatcaaaaccaaaaatgacgaaataaaaaaactagaggatgagaaagatgaatta
cattcagaattgagtggattacatcgacagtttgatactcgagcgaaattggctttgaaa
cgtactgatgctaaaaagaaaaacgatggaattcatacaataattgaatctcacggtcca
aaattcaaagaattggtcaaaactgaaatgacactcgagaatgccgaaacggatattgga
aacgccctccgagatatagagcgtcaatcaagagatactgaaagtgtcaacgccactgct
gctcggaatttacagaccgtggataccaagttgcagatgaacaaggctaaaacgaagtct
ttagaacgcgaactctatggtctcgaaaagaaaatcaaagacgcagctgatggggagact
gtttcacagtcgatcagtatcgcggaaacggaaattctttctttgaatagtgagctcgat
atcatcaaatattccgttcggtttcatcagaatttgctcgcgaaagccaaaaagggaaac
aattgcggagcttgtcaaagagaattcggagacgcacaggagatgcagcggtttgagcgt
tttgtcagttctattctagaaaacgaatctttcaaaaaactcacatcaatatatcaaagt
gaactcaaagaatggcaggaacaattagaacggatgaagaatttattgcctgatgagcta
gcagtgaacaagttacgggaaacagaattaccaagcttggaagaggagttgaaagagctc
gagtccaagtgggctgcttccagtcatacatccgaagatgctcgaagagacgttgagcgg
ctcaaagatcagatgagcgaactgatgttatgcaagcgttcagtgatcgacatgactcga
atgcgcctcgaagctgacgacctagagcgcgagatacagcgattggaatttgaactagaa
aactcgggctccaccaagacgagtgaagttgtggaagctcaacttgaagctttaactaca
aaacttgcggaagtgcggaaagaagtgaatagcttggtcactgaaagagacaacaaaaga
gcatctattcaggtgctcgagaaccagatacatcaaatcgagcttgacctgaataataag
agacaacagatcaaagaacgagaaggatttgaaaagcaaaaggaagaatcgaggaccgaa
attgcgcaattggacgagatgatcaagaaaatcgatgagcacatcagaacgtttgctgag
cccattagccgactggaaaatgagcttaaagagctcagtgctaggaattcgggagctgaa
ctagaagttgtcaagaaagtacagatgtataataaaagtcttaaccagattgaaacgatt
aatcgagaaattgccaaatttgttgaatcgggtattgagacgagtatgcaacgctgtcag
ggagagattgaccgactggaacagttgatcaaacaggctactcaaatgctagcagagtcg
caacagacgttgatcgatttggatcaagagtcgacgaaagcaaaggaatttgaacggaat
atcagtgataatatcagattacgagctcatcgggacgagatagctgggttggaaagcgct
ttgcaagaattggacgtcgaaggagctcgtgaggcaaacaggaaatatgatgaagagtat
cataaagctcgaaagttacaagcggatttccaggcagatcatgcgaggttgggcggtgag
attggaatggatagaaaaaatctaaaagacaagaaaagtgaaatggacgtcgagtttaag
gatatcttcaaccgacatcgtaatcaattgatcaaagtcaagactgttgagatcgcgaat
caagacttggataagtatgcaaaagcgctagatcaggcgatcatgaagtaccattcgcac
aagatggccgagataaacgatactattcagaccttatggcaaaagacttatcaagggaca
gacatcgataagattttgatcaaatctgaaaacgagaatgcaaaaagcaatagatcttat
aactatagggtggtgatgttgaaggatcaagttgagatggatatgagaggtcgatgttct
gctggacaaaaagttttagcttcgatcatcattcgattggctttggctgaatcttttggg
actaattgtggtattcttgccttggatgaacctacgacgaatcttgataaagataatatt
aatgctttggctaatgctctttctgagatcatcaaagagagaagagatcaagctaacttt
caactagtcgtcatcacgcacgacgaagactttctcaatcaattaggtcaatctgacgta
cttgataaatattggcgtgtcagtcgaaacactcaacaaaagtcaatcattgaacgtcaa
cggttgatgtga
DBGET
integrated database retrieval system
