Melampsora larici-populina: MELLADRAFT_50652
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Entry
MELLADRAFT_50652 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K11292
transcription elongation factor SPT6
Organism
mlr
Melampsora larici-populina
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mlr03021
]
MELLADRAFT_50652
03036 Chromosome and associated proteins [BR:
mlr03036
]
MELLADRAFT_50652
Transcription machinery [BR:
mlr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
MELLADRAFT_50652
Chromosome and associated proteins [BR:
mlr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
MELLADRAFT_50652
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
HTH_44
YqgF
Spt6_S1
Tex_central_region
SPT6_acidic
HHH_3
SH2
HHH_9
S1
REF
Motif
Other DBs
NCBI-GeneID:
18928725
NCBI-ProteinID:
XP_007417057
JGI:
Mellp1_50652
UniProt:
F4S6W4
LinkDB
All DBs
Position
Unknown
AA seq
1598 aa
AA seq
DB search
MASIDEEPAIGDVPDEYDEADPQKALEDSSEEEEEGSEEERAVREGFIADEEEEEEEEEE
DYSSRKRKRKHKHRHKHKDRKKHRSVAIEAEDEEEGLDEDDLELLAENTGTASRKPKRRL
RRAGSVASDDLDLDHDDDLHRIFDDEDEPAVPRRRDGLGVDDELDDFIEEDEFPEDEALP
RQKSTKRKSKASSVRVDAGRQKQAGRLMGALAPDVSGIDPDAWDEVMEVFGNGEDYEWAL
ELDEYEDLGADGGQAEYDADGAFNRSTAVQLKDIFEPSQIKDRMLTEADEAIRLLDIPER
TQLASSTLANATSTEPLLTSEELDRAAEWVSQRISERCNTLFLQKDRHGFFPILKEPFIV
SIKDVLEFFLAKYLEVPFVFMNRQDYITHHTSDNQGNETNVQYLSRDELWKVHTLSLKYV
ALLDRKKGLRRLFDKLDAEDDYFEECYGRIQSVEEVSDLMQWLTLKYGSRLREAQADVRE
DADALAADIIPDGMRNANASDKPVRYKKASRESRYERAKGSVVSKLASDLGISSRDLSAD
FLARNRQHFPDDPPLPPAVYAEEFAQPETEFNDSRKALEAAKLIVSTDIGRDPMLKKHVR
QLFRQHGVVTVTPTDGGMSKITELHPYYAFKYLGQKPFSGLKQSSQYLQIMAAEQELLVN
VQVHLNPETDNTFKTEMMNTYKSDFTSELATSWNELREEILLHAIEHMLLPDAARWAKNY
LKDEAEEYVAQRCAEELEERIDVAPYRPAHFLDDGEVPSVVAISNGAGDPRRDSTFVIYL
DDAGRFRDHMKLDNLRDPTPRQDLSDFLQKRTPDVIVVGGFSASTNRLLNDVKAVAHELS
EKMKNELQSSGEMNDEALSRMGFPVIVARDDTARLCQQTKLGEDDFGGLPAIGRYCIALA
RYVQSPLNEYAAAGQDITAISFHPDQQFLPKDLLQVYLERALVNIVNSVGVDINRAVNDH
YYQHLLQYVCGLGPRKAQKLIKMINAKSSEGTLISRNELITEELVTKNIFYNCAGFLRIK
QGDLTTARETEPDILDDTRIHPEDYYVARKMAADAQELDEEDLAEQPPSQVVSDLLAADS
GNGAAKLDDLNLDDFAVELLRLLNVRKRLTLYQIRTELQKPYAEKRSTFDALTPEQMFDL
WTGENEATLSRGSVIPVKITKSRDRGLTVRLDSGIEGFIEQRYMVEEGTPDMSKFPVGST
IQALVMEIHKDRFMVELNSQPTAVAAAAGQQKKVKTDDHFDEIQMQMDKDRLESRKKIGS
RRTQRVIKHPNFHNFNSGQAEQHLANQQRGDCVIRPSSKGTDHLAVTWKVDTGVYQHIDV
LELDKQNEFSLGRTLKIGGRYSYSDLDELIVSHVRAMARKVEEMIAHERYKSTPEEMSKY
LNTYLMANPDRSVYAFCIDKDTPGCFFLGFKADKNTPMQKWTVKVSPGAYELNGTQAGDM
LSLCNAFKTQYTARSALPAGQGRVDVYGRQTPMLNGRTPINGGRTPLIGGRTPMLGNRTP
LATPRYTGTPQHAPPPPAPQTISTPRYSGGLTPAPPPPTAWNPGTPHAGYAPPPPPGPPR
AGYPMNQTPLRYPGPLPPGMPPPPPQTWGPPPARQHYP
NT seq
4797 nt
NT seq
+upstream
nt +downstream
nt
atggctagcattgacgaagaaccagctataggagacgttccagatgaatatgatgaagct
gatccacaaaaggcattggaggacagtagtgaagaagaagaagaaggaagcgaagaggag
cgggctgtacgagaaggatttattgcggatgaagaggaggaagaagaggaagaagaggaa
gattattcttctcgaaaacggaaacggaaacataaacatcgtcataaacacaaagaccgt
aaaaaacatcgatctgtcgcaatcgaagctgaagacgaagaagaaggcttggatgaagac
gatttagagctattggctgagaacactggtacggcttcaaggaagccaaagcggcgtctt
cggcgtgcaggatcggtagcctccgacgatctcgatttagaccatgatgacgatcttcac
cggatattcgatgacgaggatgagcctgctgtacctcgtcgtcgagacggccttggtgtg
gatgatgaattagatgactttattgaagaagatgagtttcccgaagacgaagcgcttcct
cgacaaaagtcaaccaagcgcaaaagcaaggcgtcttctgtgcgtgtagatgctgggaga
cagaaacaggctggtcgtcttatgggtgcccttgctcctgacgtatccgggatcgaccca
gacgcatgggatgaagtgatggaagtctttgggaatggtgaagactacgaatgggctctc
gagctggacgaatacgaagatctaggcgcagatggcggacaagctgaatacgatgctgac
ggcgcctttaataggtcaacagctgttcaactgaaggacatcttcgaacctagccaaatc
aaagaccgaatgcttaccgaggctgatgaagccatccgacttttggacatcccagagcgt
actcagttggcctcctccactctagcgaatgccacatcgactgaaccgctcttgacttct
gaggagctcgaccgcgctgcagagtgggtttcacagcggatctctgaaaggtgtaataca
cttttccttcagaaggatcgccatggtttcttcccgatcttgaaggagcctttcatagtt
tcgataaaagacgtattggaattctttctcgccaagtatcttgaagtgccatttgttttt
atgaatcgacaagactatatcacccatcatacatcagacaaccaaggcaatgaaaccaat
gtccaatatcttagtcgagatgaattatggaaagtccacacactttctctcaagtacgtt
gctctcctcgatcgcaaaaagggtctgaggagattattcgacaagttggacgctgaggat
gattactttgaggaatgttatggacggattcaaagtgttgaagaagtttccgatcttatg
caatggctcacgctcaaatatggctctcgattacgggaagcacaagctgatgttcgagag
gatgccgatgcactcgctgccgatattattcccgatggtatgagaaatgccaatgcctca
gataaaccggtcagatacaagaaagcttccagagagagtagatacgaacgagcgaaaggc
agcgtcgtcagtaaactagcttcagatttgggtatctcttccagggatctctctgcagac
tttttagcacgaaaccggcaacactttccagatgaccctccattaccaccagcggtctat
gcagaagagtttgctcagccagagactgaatttaatgattcgcgtaaggcattggaagct
gcaaagttgattgtaagcacggatatcgggcgtgaccccatgctcaaaaagcatgtccgt
caattgtttcgacagcatggtgttgtcactgtgacacctacagacggtggaatgtcgaaa
attactgagctacatccctactacgctttcaaatacttagggcagaagccgttctctggc
ctcaaacaatcatctcagtatcttcagattatggcagctgaacaagagctactcgtcaat
gtgcaagtccatctgaatcctgaaacggacaacaccttcaagaccgaaatgatgaacaca
tacaagtctgattttacaagcgagttggccacaagttggaatgagttgagagaagaaatc
ttgttgcatgcgattgaacacatgttgctgccggacgccgcaagatgggcaaaaaattat
ctcaaggatgaagcagaggaatatgtggcccagcgatgtgctgaagaacttgaagaacgc
attgatgtcgcaccttatcgaccggcacattttttggacgacggagaggtgccatcagtg
gtagctatatccaatggggccggagatcctcgacgtgactctacttttgtgatttacctg
gacgacgcgggaagatttcgtgaccacatgaaacttgataatctgcgcgatccaacccct
cgacaagatttatcagactttttgcaaaaacggactcccgatgtgatcgttgtcgggggc
tttagtgcctcaacgaataggctgttgaacgatgtcaaggcagtcgcccatgaattgtca
gaaaaaatgaaaaatgaattacagtcatctggtgaaatgaatgatgaagcattaagtcgt
atggggtttcccgtcatcgttgctagggacgacactgcaagattgtgtcagcagactaaa
cttggtgaggacgactttggtgggctgcctgccattggaagatactgcatcgctctggca
agatacgttcagagtccgttaaacgaatatgccgcggctggacaagatatcacagcaatt
tcattccaccctgaccaacagtttctgcccaaggatcttctccaagtatacctcgagcga
gctttggtcaatatagttaactccgtgggtgtcgatatcaaccgtgctgtcaacgatcac
tattatcaacatctccttcaatacgtctgtggtcttggtccccgtaaggcacaaaagttg
atcaagatgatcaacgcaaaatcctctgaaggtactctgatatcaaggaacgagttgata
acggaggaactggtgacgaagaacatattttacaactgtgctggtttccttagaatcaag
cagggagatctgactacggcgcgagaaacagaaccggatatccttgatgacacacgtata
catccagaagattactatgtcgcgcgcaaaatggctgctgatgctcaagagctagacgaa
gaggacttggccgagcagcctccgtcacaagtcgtcagtgatctactggcagccgattca
gggaatggagctgcgaagttggatgatctcaatctggacgactttgcggtagagctgcta
agattgttgaacgtacgaaagcgactgacgttgtatcagattcgtacggagcttcaaaag
ccgtacgcggagaagcgttccacttttgatgcattgacgccagagcaaatgttcgacctc
tggacaggtgaaaacgaagccaccctgtcgcgcggttcagtgatccctgtgaaaatcacg
aagtctcgcgatcgaggtctaacagtccgtctcgattccggaattgaaggtttcattgaa
cagagatacatggtcgaagaaggaactcccgacatgagcaaatttccggtgggatctact
atacaagctctagtgatggaaattcacaaagatcggtttatggttgagctcaattcacag
ccaacggctgtggcggcagctgcaggccaacaaaagaaagtcaagaccgatgatcacttt
gatgagattcaaatgcagatggataaggaccgcttagaatccaggaagaagattggcagc
cgtcgaacccaacgagtaatcaaacatcctaactttcataacttcaactctggtcaagct
gaacaacatctagcgaaccagcagcgaggtgactgtgtgattagaccaagttcaaaggga
actgatcatctggccgttacatggaaagttgacactggagtttatcagcatatcgacgtt
ttggaattggacaagcagaatgaattctctctgggccgcaccttgaagattggagggcga
tattcctattcggatttagatgagctgatcgtatctcatgtgcgagcaatggccagaaaa
gtcgaggagatgatcgcccacgaaaggtacaaatccacccccgaagaaatgtcaaagtat
ctcaacacgtatttgatggcaaaccccgataggtccgtgtatgcattctgcattgacaag
gatacgccaggttgtttttttctcgggttcaaggccgataaaaacacacccatgcagaaa
tggaccgtcaaagtgtccccgggcgcatatgaattaaatgggactcaagctggtgacatg
ctttcgctttgcaatgcattcaagacacaatacaccgcaagatccgcccttccagcagga
cagggccgcgtagacgtgtacggacgccagacacctatgctcaatggccgaacaccgatc
aacggaggtcgaacaccattgataggaggtagaactccaatgcttggtaaccggacgcct
ctcgccacgcctcgatacaccggtactcctcaacacgcacctccgccacccgcaccccag
acgatttctacaccgcgttattcaggcggcctaacacctgcgcccccgcctccgaccgct
tggaatcccggaacgccgcatgcggggtatgcccctccaccgccaccaggtcctccaaga
gccggctacccgatgaatcaaaccccacttcgatatcctggccctcttcctccaggcatg
cccccgcctccaccacagacttggggacctccccctgcgcgtcagcattacccctag
DBGET
integrated database retrieval system