Melampsora larici-populina: MELLADRAFT_50904
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Entry
MELLADRAFT_50904 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
mlr
Melampsora larici-populina
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mlr03009
]
MELLADRAFT_50904
04121 Ubiquitin system [BR:
mlr04121
]
MELLADRAFT_50904
Ribosome biogenesis [BR:
mlr03009
]
Eukaryotic type
90S particles
Other 90S particles
MELLADRAFT_50904
Ubiquitin system [BR:
mlr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
MELLADRAFT_50904
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Sof1
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
WDR55
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
eIF2A
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
18928750
NCBI-ProteinID:
XP_007417978
JGI:
Mellp1_50904
UniProt:
F4S9F4
LinkDB
All DBs
Position
Unknown
AA seq
477 aa
AA seq
DB search
MKIKVLARSLDNHQPQSHGAPAPIHKNLDPSLHPHARSREYTRAVTASKLNRMFAKPFIG
QLDGHRDGIYVMGKDPLKLTQVVSGAADGEVRVWDLGTRACTISLTEAHRGRVTGVTFLP
AKFQGEEAESRTSRLGSRKVLTCGIDKVVKMWDLGPRNDPGADRLVNTYQGKHGFNDIDH
HHTEPVFVTASDKLHIWDVTKSSPISDLSWNSARSGANHCVTFSPSEHNVLASAGSSSDR
SICLYDMRSNKALGRLIMQMRMNCLRFNPQQPSVLLAAGEDHQLYTFDIRYMKSATQVFK
DHVGPVMSCDWSPTGQGFISGSYDRTLRIWSTSDTTFHRKGRSIDVYHTKRMQRVFSSIF
TLDGKFSLTGSDDGSIRIWKSTAAEGLGVKSGREMASKEYRDELRQKWNAVEGVGKLERQ
RYLPKPIYHAQKLRTEMLEARAKKEDNRNAHRKRKREGESTEKPKKERQKGLLALQS
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcaaggtacttgcacgctcgctcgataatcatcaaccccagtctcatggcgct
ccggctccaattcataaaaacctcgatccttctcttcaccctcatgcacgttcaagagaa
tacacacgagctgtgacagcttcgaaattgaataggatgtttgccaaaccatttatcggt
caattagatggacatcgagatgggatttacgttatgggaaaagatccactcaagttaact
caagttgtttcaggagctgctgatggtgaagttagagtttgggatctcggaacaagagct
tgtacaattagtcttactgaagcacatcgtggaagggtgactggtgtgacattcctacct
gctaaattccaaggcgaggaggctgagtcaaggactagtagactaggtagtaggaaggtc
ttgacatgtgggattgataaggttgtgaagatgtgggatttaggtccaaggaatgaccca
ggtgctgaccggctggtgaatacctatcaaggaaaacatgggtttaacgatattgatcat
catcatactgagccagtctttgtgacggccagtgacaagctacatatttgggatgtgacc
aagtcttctcccatatccgacctttcttggaattccgctcgttccggtgccaatcactgt
gtcacattctcaccctcagagcacaatgtcttagcttctgcaggatcatcatcagaccga
tccatatgcctctatgacatgcgctccaacaaggcgcttggccgattgatcatgcagatg
cgaatgaattgtttgcgattcaatcctcaacagccttccgtgttacttgcagctggggaa
gaccatcagctttacacattcgacatccggtatatgaaatctgctactcaagttttcaaa
gaccatgtaggacccgtgatgtcctgtgactggtcacctaccggccaaggatttatctca
ggctcttatgatcgtacattgcgcatttggtcaacttctgatacgactttccatcgcaaa
ggaagatcaatcgacgtttatcataccaaacgaatgcaacgtgtcttttcgtccattttc
actctcgatggtaaattttcccttactggtagtgatgatggatctattcgaatatggaaa
tcgactgcagctgagggtcttggtgtgaagagtggacgagagatggcaagtaaagaatat
agagacgaacttcgacagaagtggaacgcagttgaaggagtaggaaaattagaaagacaa
agataccttccaaaacctatttatcatgcacaaaaattacgaacagagatgttggaagcc
agagcaaagaaagaagacaatcgaaatgcacatcgaaagcgaaaaagagaaggagaaagt
acagaaaaaccaaagaaagaaagacaaaaaggtttacttgctcttcaatcttga
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integrated database retrieval system
