Melampsora larici-populina: MELLADRAFT_51043
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Entry
MELLADRAFT_51043 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K10259
F-box and WD-40 domain protein MET30
Organism
mlr
Melampsora larici-populina
Pathway
mlr04111
Cell cycle - yeast
mlr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
MELLADRAFT_51043
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
MELLADRAFT_51043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mlr04121
]
MELLADRAFT_51043
Ubiquitin system [BR:
mlr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
MELLADRAFT_51043
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_SCAP
EIF3I
WDR55
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
F-box-like
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_DCAF4
F-box
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_SPT8
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_IP5PC_F
Beta-prop_HPS5
Beta-prop_IFT140_1st
F-box_4
Beta-prop_LRRK2
Beta-prop_IFT122_1st
Beta-prop_DCAF12
WD40_like
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
18928766
NCBI-ProteinID:
XP_007418371
JGI:
Mellp1_51043
UniProt:
F4SAI9
LinkDB
All DBs
Position
Unknown
AA seq
794 aa
AA seq
DB search
MRTSNQSNNQLITKDTTTTTTTTTDTIQNNNNNHVQLPLQQINSPDFLLNPNPFNFIPNN
TSTTSIDFNQPSSSSTISISNQSQNQHHMNQTSSGNYRVSAFGVSDHQSSHLIHPGMVNG
KPGGGDCAKLCPRHQRMANEGTNRQLQAEIETLPESDQEAINTAWGLFSSSNTQRRRLIL
SGLLTICCPSQLRFLTDSLKKVCRIDPFSRLPKEISLKILCYVDAISLGKSAQVSRLWKK
LSDDDLIWRLMCEQHIEKKCTKCGWGLPLMEKRKRMDPSTSTIKSKETHDQTSDSIHLHP
NKRICQRDDGETDLIASTSTTTSTKFTNPIRSPNPPNPIPTPTCRTPTKPWKMVYTERLA
LERNWRKGIYEETILSGHTDSITCLQLEEHFTSPSWPILMTGSWDRTIRVWNLETKETMN
VLKGHTRGIRCLQFDKSKLITGAMDGNLKIWNWRTGECMRSIQAHEEGVVCLKFDEEILA
SGSADGTIRIWNFKTGGGFVLRGHREWVNSVEIWSPSNPIHSTTTSTASDDGLIKVWNLD
RRETVRVLEGHMAQVQSIKLITIDEVENDEQVETNGDGNEDQLEPIFGNGVLRGKKPVLV
SGSLDNCLKVWDLEKGRCRRTMFGHIQGVWNVDADRLRVVSGSHDRSLKIWDRITGKCIH
TIVGHRGAVMTIGLSDDKIISGGDDGEVRIWSFAPVEHGLRLHQHHLNQLQLQHDHQLQH
DQQLQLDQQLQHQHDHQDLNEDEEKYEDLNRDEDKDEDKDKIKVCEIEQTEKNEGIQNIQ
GNDNGKGKGKEVLE
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgagaacatcaaatcagtcaaacaatcaactcatcactaaggatactactactactact
actactactactgatactattcaaaacaacaacaacaaccatgttcaactaccacttcaa
caaatcaattcacctgatttcttactcaatccaaacccatttaactttatacccaataac
actagtactacatccatcgatttcaatcaaccatcatcatcatctaccatctcaatctca
aaccaatctcaaaaccaacaccatatgaatcaaacttcatcaggaaattacagagttagt
gcattcggagtatcagatcatcaatcttcacatttaatccatccaggcatggtaaatgga
aaacccgggggaggagactgtgccaaactatgtccacgtcatcaaagaatggcgaacgaa
ggcacgaaccgacaactccaagcggagatcgaaaccttaccagaatccgatcaagaagcc
atcaacacagcctggggacttttctcatcctcaaacacccaacgtcgtagactaatccta
agcggtctactcacaatctgttgtccatcccaactccgattcttaacagattcattaaag
aaagtctgtagaattgatccttttagtaggttacctaaagagattagtttaaagattttg
tgttatgttgatgcaatcagtttgggtaaatcggcacaggtttcaaggctttggaaaaaa
ttgtcggatgatgatttgatttggagattaatgtgtgaacaacatattgaaaagaaatgt
acgaaatgtggttggggtttaccattgatggaaaaacgcaaacggatggatccatccaca
tcaactatcaaaagtaaagaaactcacgatcagacctcagattcgattcatttacatcca
aacaaacggatttgtcaaagagatgatggcgagaccgatctgattgcttctacttccacc
acaacttccaccaagttcaccaacccaatccgatccccaaatcctcctaatccgattccc
accccaacatgtcgtacacctaccaaaccatggaagatggtgtataccgaaagattagcc
ctagaacgaaactggcgcaaaggaatctatgaggagacaatcctaagtggacatacagat
tcgatcacctgtttacaactagaagaacacttcacatcaccatcatggccgatcttgatg
accggtagttgggatcgaactataagagtatggaatttagaaactaaagaaactatgaat
gttttaaaaggtcatactagagggatcagatgtttacaattcgataagagtaaattgatc
actggggctatggatgggaaccttaagatttggaattggagaacgggtgagtgtatgaga
agtattcaggctcatgaagaaggtgtggtttgtttaaagtttgatgaagaaatcttggcg
agtggtagtgcggatggaacaataagaatatggaactttaaaaccggtggaggattcgtt
ctaagaggccatcgagaatgggtgaattcagtggagatatggtcaccatccaatccaatc
cattctacaaccacttcaaccgcatcagatgatggattaataaaagtttggaatttagat
cgaagagagacagtaagggttttagaaggtcatatggcccaagtccaatctattaaactg
attaccatagatgaagttgagaatgatgaacaagtcgaaacgaatggagatggtaatgaa
gatcaacttgaaccgatctttgggaacggagtcttgaggggtaaaaaaccggtcttggtt
tctggtagtttggataattgtttaaaggtttgggatttggagaagggaaggtgtaggaga
actatgtttggacatattcaaggggtttggaatgttgatgctgatagattaagagtggtt
agtggttcacatgatagatcattaaagatttgggataggatcacagggaaatgtattcat
acgatcgtaggacacagaggagcggtgatgacgattggattaagtgatgataagatcatt
agtggaggagatgatggagaagtaaggatttggtcgtttgctccggttgaacatgggttg
agacttcatcagcatcatttgaatcaacttcagttacagcatgatcatcaacttcaacat
gatcagcaacttcaactcgatcagcaacttcaacatcaacatgatcatcaagatcttaat
gaagatgaagagaagtatgaagaccttaatcgagatgaagacaaagatgaagacaaagac
aaaattaaagtatgtgaaattgaacaaacagagaagaatgaaggcatacagaacattcaa
ggaaacgacaatggaaaaggaaaagggaaagaggttttggaatga
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integrated database retrieval system