Melampsora larici-populina: MELLADRAFT_53626
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Entry
MELLADRAFT_53626 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K10752
histone-binding protein RBBP4
Organism
mlr
Melampsora larici-populina
Pathway
mlr03082
ATP-dependent chromatin remodeling
mlr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
MELLADRAFT_53626
03083 Polycomb repressive complex
MELLADRAFT_53626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mlr03036
]
MELLADRAFT_53626
Chromosome and associated proteins [BR:
mlr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
MELLADRAFT_53626
Histone modification proteins
HAT complexes
HATB complex
MELLADRAFT_53626
HDAC complexes
Sin3A-HDAC complex
MELLADRAFT_53626
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
MELLADRAFT_53626
PRC2.2
MELLADRAFT_53626
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
MELLADRAFT_53626
Heterochromatin formation proteins
Other heterochromatin formation proteins
MELLADRAFT_53626
Chromatin remodeling factors
NuRD complex
MELLADRAFT_53626
NuRF complex
MELLADRAFT_53626
NuRF complex (fruit fly)
MELLADRAFT_53626
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
MIOS_WD40
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_RIG_1st
WD40_RFWD3
Beta-prop_WDR19_1st
eIF2A
Beta-prop_SPT8
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
18928872
NCBI-ProteinID:
XP_007415468
JGI:
Mellp1_53626
UniProt:
F4S1X1
LinkDB
All DBs
Position
Unknown
AA seq
420 aa
AA seq
DB search
MPSHQMETDIEEQETQIWKKNSPFLYDLVLTHALDWPTLTTQWFPDSELSSDKSYSNQRL
LIGTHTSDSEPNYLHIVNVRLPNPDAEDLELDKYDEQSGEIGSYSDTQPRFKVTQSIPHT
GEVNRARYMPQNPDLIATKTVMGDVYVFDRTKHPSDPPKDNICKPDITLQGHTKEGFGLD
WNTIKTGHLLSSSEDETICHWDIEAYTKGDPVLKPYRVYKGHSSVVSDVSWHYHKDSVFA
SVGDDKQLLIWDTRNRESDKAVQVVADAHAGEVNTVAFSPQSDFLLVTGGSDQCVNLWDL
RNLSTRLHALTAHTDELISLAWSPFHPTILASGSSDRRTNIWDLSKIGEEQTPDDAEDGP
PELLFIHGGHTARPTDIAWSPTKPWHLVTAAEDNVIQLWSPNSTITKGPNGIVIPVDELE
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgccgagtcatcaaatggaaactgatatcgaagaacaagagactcagatctggaagaag
aactcaccttttctctatgaccttgtccttactcacgcgcttgactggcctacgctcacc
acacaatggtttcccgattctgaattatcgtccgataaatcctactccaatcaacgtctc
ctgatcggaacacacacctcagatagcgaacctaattatctgcatatcgtcaatgtccgc
ttgcccaatccggatgctgaagacttggagcttgataaatatgacgaacagtctggcgaa
attggatcgtattctgacacacaacctaggttcaaggtgacacaatctattcctcacact
ggtgaagtaaaccgagcgagatatatgcctcaaaaccctgatctgatagccacaaagact
gtgatgggtgatgtttacgtatttgatcgcactaaacatccttccgatccgcccaaagat
aacatttgcaaacccgacatcactcttcaaggtcataccaaagaaggcttcggtcttgac
tggaacacaatcaagacgggtcatctattgagctcatctgaagacgagacaatatgtcat
tgggacattgaagcctataccaaaggcgaccccgtgctgaaaccttatcgagtttacaag
gggcattcgtcggttgtttcagatgtctcgtggcattatcataaagacagcgtgtttgca
tcggtcggtgatgataagcagctgttaatctgggacacacgcaatagagaatctgataag
gccgttcaagttgtggcggacgcccatgctggcgaagtgaatactgtggccttttcgccc
cagtctgattttttgcttgtgacaggtgggagcgaccaatgtgtgaacctatgggatctg
cgtaatctcagtacccgacttcacgcgctcacagcgcacactgatgagctcatctcactg
gcctggtctcccttccaccctaccattctcgcatccggttcctcggaccgacgcacaaat
atctgggatctgagcaaaatcggcgaagaacaaaccccggacgatgcagaagatggccca
cctgagcttctctttattcatggtggtcacaccgcacgacccacagacatcgcgtggagt
ccaacaaaaccatggcaccttgtgaccgctgcggaggacaatgtgatccagctgtggtct
cccaactctaccatcactaaaggcccaaacgggatcgttattcctgttgacgagttagag
tga
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