KEGG   Melampsora larici-populina: MELLADRAFT_53626
Entry
MELLADRAFT_53626  CDS       T03138                                 
Name
(RefSeq) hypothetical protein
  KO
K10752  histone-binding protein RBBP4
Organism
mlr  Melampsora larici-populina
Pathway
mlr03082  ATP-dependent chromatin remodeling
mlr03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:mlr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    MELLADRAFT_53626
   03083 Polycomb repressive complex
    MELLADRAFT_53626
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mlr03036]
    MELLADRAFT_53626
Chromosome and associated proteins [BR:mlr03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     MELLADRAFT_53626
  Histone modification proteins
   HAT complexes
    HATB complex
     MELLADRAFT_53626
   HDAC complexes
    Sin3A-HDAC complex
     MELLADRAFT_53626
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     MELLADRAFT_53626
    PRC2.2
     MELLADRAFT_53626
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     MELLADRAFT_53626
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    MELLADRAFT_53626
  Chromatin remodeling factors
   NuRD complex
    MELLADRAFT_53626
   NuRF complex
    MELLADRAFT_53626
   NuRF complex (fruit fly)
    MELLADRAFT_53626
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 CAF1C_H4-bd WD40_Prp19 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st WDR55 Beta-prop_EML WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR90_POC16_2nd MIOS_WD40 Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_RIG_1st WD40_RFWD3 Beta-prop_WDR19_1st eIF2A Beta-prop_SPT8 ANAPC4_WD40 Beta-prop_HPS5 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st
Other DBs
NCBI-GeneID: 18928872
NCBI-ProteinID: XP_007415468
JGI: Mellp1_53626
UniProt: F4S1X1
LinkDB
Position
Unknown
AA seq 420 aa
MPSHQMETDIEEQETQIWKKNSPFLYDLVLTHALDWPTLTTQWFPDSELSSDKSYSNQRL
LIGTHTSDSEPNYLHIVNVRLPNPDAEDLELDKYDEQSGEIGSYSDTQPRFKVTQSIPHT
GEVNRARYMPQNPDLIATKTVMGDVYVFDRTKHPSDPPKDNICKPDITLQGHTKEGFGLD
WNTIKTGHLLSSSEDETICHWDIEAYTKGDPVLKPYRVYKGHSSVVSDVSWHYHKDSVFA
SVGDDKQLLIWDTRNRESDKAVQVVADAHAGEVNTVAFSPQSDFLLVTGGSDQCVNLWDL
RNLSTRLHALTAHTDELISLAWSPFHPTILASGSSDRRTNIWDLSKIGEEQTPDDAEDGP
PELLFIHGGHTARPTDIAWSPTKPWHLVTAAEDNVIQLWSPNSTITKGPNGIVIPVDELE
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgccgagtcatcaaatggaaactgatatcgaagaacaagagactcagatctggaagaag
aactcaccttttctctatgaccttgtccttactcacgcgcttgactggcctacgctcacc
acacaatggtttcccgattctgaattatcgtccgataaatcctactccaatcaacgtctc
ctgatcggaacacacacctcagatagcgaacctaattatctgcatatcgtcaatgtccgc
ttgcccaatccggatgctgaagacttggagcttgataaatatgacgaacagtctggcgaa
attggatcgtattctgacacacaacctaggttcaaggtgacacaatctattcctcacact
ggtgaagtaaaccgagcgagatatatgcctcaaaaccctgatctgatagccacaaagact
gtgatgggtgatgtttacgtatttgatcgcactaaacatccttccgatccgcccaaagat
aacatttgcaaacccgacatcactcttcaaggtcataccaaagaaggcttcggtcttgac
tggaacacaatcaagacgggtcatctattgagctcatctgaagacgagacaatatgtcat
tgggacattgaagcctataccaaaggcgaccccgtgctgaaaccttatcgagtttacaag
gggcattcgtcggttgtttcagatgtctcgtggcattatcataaagacagcgtgtttgca
tcggtcggtgatgataagcagctgttaatctgggacacacgcaatagagaatctgataag
gccgttcaagttgtggcggacgcccatgctggcgaagtgaatactgtggccttttcgccc
cagtctgattttttgcttgtgacaggtgggagcgaccaatgtgtgaacctatgggatctg
cgtaatctcagtacccgacttcacgcgctcacagcgcacactgatgagctcatctcactg
gcctggtctcccttccaccctaccattctcgcatccggttcctcggaccgacgcacaaat
atctgggatctgagcaaaatcggcgaagaacaaaccccggacgatgcagaagatggccca
cctgagcttctctttattcatggtggtcacaccgcacgacccacagacatcgcgtggagt
ccaacaaaaccatggcaccttgtgaccgctgcggaggacaatgtgatccagctgtggtct
cccaactctaccatcactaaaggcccaaacgggatcgttattcctgttgacgagttagag
tga

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