Melampsora larici-populina: MELLADRAFT_59931
Help
Entry
MELLADRAFT_59931 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
mlr
Melampsora larici-populina
Pathway
mlr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MELLADRAFT_59931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlr03019
]
MELLADRAFT_59931
Messenger RNA biogenesis [BR:
mlr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
MELLADRAFT_59931
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
DUF4028
Motif
Other DBs
NCBI-GeneID:
18929449
NCBI-ProteinID:
XP_007405561
JGI:
Mellp1_59931
UniProt:
F4R9B6
LinkDB
All DBs
Position
Unknown
AA seq
205 aa
AA seq
DB search
MTSTVTLYPLSNYTFSTKEAQPEEDPSVTSRLQRLQNNYEDFGMRRTVEGILVVHEHGHP
HVLMLQIANAFFKLPGDYLRPGEDDIEGLKERLDERLAPPPGQFGAGLTSAQGQKDWEIG
DCLSQWWRPNYESFMYPYVPAHITKPKECKMLYLVQLPEKKVLSVPKNMKLLAIPLFELY
DNPQRYGPQLAAIPHILSRFSFIYA
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgacctcaactgtcaccttatacccactttcgaattataccttttcaacaaaagaagca
caaccagaagaagatccatctgtgacttctagattacaaagattacaaaacaattatgaa
gatttcgggatgagacgtacagtagaaggaatcctagtagtacacgagcatggtcatcct
catgtgcttatgcttcaaatcgctaatgcttttttcaaattaccgggtgattatttaaga
ccaggtgaagatgatattgaaggtttaaaagaaagattagatgaaagattggctcctcct
cctggtcagtttggggctggacttactagtgctcaaggtcaaaaagattgggaaattggt
gattgtctttcacaatggtggagaccaaattacgagagctttatgtatccttatgttccg
gctcatattaccaaacccaaagaatgtaaaatgctatacctggttcaattaccagagaag
aaggttttatcggttccaaagaatatgaaattattggctattccactctttgagttgtat
gataaccctcagcggtatggtcctcaattagctgctattcctcatatcttatcaagattt
tcatttatctatgcataa
DBGET
integrated database retrieval system
