Melampsora larici-populina: MELLADRAFT_70820
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Entry
MELLADRAFT_70820 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K12586
exosome complex component RRP43
Organism
mlr
Melampsora larici-populina
Pathway
mlr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MELLADRAFT_70820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlr03019
]
MELLADRAFT_70820
Messenger RNA biogenesis [BR:
mlr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
MELLADRAFT_70820
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
18931646
NCBI-ProteinID:
XP_007405093
JGI:
Mellp1_70820
UniProt:
F4R8B1
LinkDB
All DBs
Position
Unknown
AA seq
292 aa
AA seq
DB search
MNKLKMKSKDPLASSQETSKLNEFDIENYKRLQPINYLKQMIKENKRSDLIRSSVRQIRL
IKINNNSISTSNGSSLVSIGNTSVLCGIRFEVSEPNFMNPNQGYIIPNIEIGSLCSSKFK
PNQINEQSQTILTQLKMILKSSEIIEPSSLVIQPEKLVWVIYIDVICLSNDGNVLDASII
SITQALQTAKRPQVEFDIETNEVILLDPNFFEPIPIPLNHTIHPFTFSIFEKREWLVDPT
LFEEDHSKGSVTVVLDSKKKLRYLLVSGEVQQGSGVLNDCLQFSFNNLNINS
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaactaaaaatgaaatcaaaagacccattggcatcatcacaagaaacctcaaaa
ctaaacgaattcgatatagaaaactataaaagattacaaccaataaactatttaaaacaa
atgattaaagaaaacaaaagatcagatttgattagaagttcagtacgtcagattaggttg
attaaaattaataataattcgatatcaacttcaaatggttcatctttagtttcgattggt
aatacgtcagttttatgtggtatcaggttcgaagtatcagaaccgaatttcatgaatcca
aaccaaggatacataatacctaatatagagatcggatcactctgttcatcgaaattcaaa
ccaaaccaaatcaatgaacaatcccaaacgatcttaacccaactaaaaatgattcttaaa
tcatcagaaatcatagaaccaagttcattagtaatccaaccagaaaaactagtatgggta
atttacatcgacgtgatctgtttatcaaatgacggaaacgttctagacgcctcgataatt
tccattacccaagctcttcaaacagctaaaagacctcaagtagagtttgacatagaaacg
aatgaagtcattttacttgatccgaacttctttgaacctattccgatcccactaaaccat
acgatccatcctttcaccttttcgatctttgaaaagagggaatggttagtagatccgact
ttgtttgaagaagatcattccaagggatcggttacagtcgttttggattcgaagaaaaag
ttgaggtatcttttggtttcgggtgaggttcagcaggggtctggtgttttgaatgattgt
cttcagtttagttttaataatttaaacatcaactcttga
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