KEGG   Melampsora larici-populina: MELLADRAFT_71106
Entry
MELLADRAFT_71106  CDS       T03138                                 
Name
(RefSeq) hypothetical protein
  KO
K12872  pre-mRNA-splicing factor RBM22/SLT11
Organism
mlr  Melampsora larici-populina
Pathway
mlr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mlr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MELLADRAFT_71106
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mlr03041]
    MELLADRAFT_71106
Spliceosome [BR:mlr03041]
 Complex B
  Other components
   Prp19-related factors
    MELLADRAFT_71106
 Complex C
    MELLADRAFT_71106
SSDB
Motif
Pfam: STL11_N zf-CCCH_RBM22 Torus RRM_YTH1 zf_CCCH_4 RRM_1 zf-CCCH_2 zf-CCCH_4 zf-CCCH_3 zf-CCCH zf-CCCH_PARP12 RRM_occluded zf-CCCH_DUS3L
Other DBs
NCBI-GeneID: 18931726
NCBI-ProteinID: XP_007407036
JGI: Mellp1_71106
UniProt: F4RCC8
LinkDB
Position
Unknown
AA seq 334 aa
MPPKHDLNKAGQEDSDFPILCETCLGANPYVRMSKQSLGKECKICTRPFTIFRWLPGAGM
RYKKTEICQTCAKLKNVCQTCLLDLQYGLPTQVRDTALGLNSKAPTSNINREYFAQNMEN
QLEGTSEMINYDRQDAGGKDVLKKLARTDPYYKRNRPHICSFYAKGECARGDGCPYRHEL
PVENELSKQNIQDRYHGRNDPVARKILSTYANSTGLTPPEDESIVSLFLSSLPPEATNES
IIRHFFTSIGIESNKIKSVVVVPTSRCAFINFINRGVAEDAASRCSVRVQISGKEVMVRW
GRSKPKKNDGNNQSDVNNQDANATIGEREIASSM
NT seq 1005 nt   +upstreamnt  +downstreamnt
atgcctccaaaacatgatttaaacaaggccggacaagaagattcagattttcctattctt
tgcgagacatgtttaggtgcgaatccatatgtgagaatgtcaaaacaatcattaggaaag
gaatgtaaaatttgtactagaccatttacaatctttagatggttacctggagcaggaatg
aggtataagaaaactgagatttgtcaaacttgtgctaaattgaagaatgtttgtcaaact
tgtttacttgaccttcagtatggtttacctactcaagttagagatactgcacttggttta
aattctaaagcacctactagtaatatcaatcgagagtattttgctcaaaacatggagaat
cagttggaggggacttctgagatgattaattatgatcgtcaagatgcaggtggaaaggat
gttttgaaaaaattggctcgaacggatccttactataaacgaaacagacctcatatctgt
tcattttatgccaaaggagaatgcgcacgtggtgatggttgtccttatcgtcacgagtta
ccagttgagaatgaattaagtaaacagaatatccaagatcgatatcacggacgaaatgat
ccagtagcacgaaagattttatcaacctatgcaaattcaacaggtcttactccacctgaa
gacgaatcgatcgtttcacttttcctatcatctttaccaccagaagctaccaacgaatct
atcattcgacacttttttacttcgattggaatcgaaagtaacaagatcaaatcagtagtt
gtagtacctacttcaagatgtgcatttatcaattttattaatagaggtgtagcagaagat
gccgctagtaggtgtagtgttagagtccaaatctcaggaaaagaagtgatggtgcgttgg
ggtagatcaaaacctaagaaaaatgatgggaataatcaatcggatgtgaataatcaagat
gcgaatgctacgattggagaaagagaaattgctagtagtatgtaa

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