Melampsora larici-populina: MELLADRAFT_71269
Help
Entry
MELLADRAFT_71269 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K12881
THO complex subunit 4
Organism
mlr
Melampsora larici-populina
Pathway
mlr03013
Nucleocytoplasmic transport
mlr03015
mRNA surveillance pathway
mlr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MELLADRAFT_71269
09122 Translation
03013 Nucleocytoplasmic transport
MELLADRAFT_71269
03015 mRNA surveillance pathway
MELLADRAFT_71269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlr03019
]
MELLADRAFT_71269
03041 Spliceosome [BR:
mlr03041
]
MELLADRAFT_71269
Messenger RNA biogenesis [BR:
mlr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
MELLADRAFT_71269
TREX complex
MELLADRAFT_71269
Spliceosome [BR:
mlr03041
]
Complex C
Other components
EJC/TREX
MELLADRAFT_71269
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
MELLADRAFT_71269
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
FoP_duplication
RRM_3
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
18931776
NCBI-ProteinID:
XP_007407656
JGI:
Mellp1_71269
UniProt:
F4REB6
LinkDB
All DBs
Position
Unknown
AA seq
218 aa
AA seq
DB search
MSAMNLDRPLDDIISEKRKQRRPAAVARRGGKANHTTGPIRHGRTTTRPQPVAMAAPAAK
ILQLPAQMGQGSKIIVSNLPTDVTENQIRELFSTTVGPVMKVALSYDNRGQSKGTAQVEF
KRNDDATKAFQQYNKRLIDQNRPMKVEIILDPARIPPPPLSTRVAPAPKPAVSVRQAAPA
AGQPRRTGGKPRGKNNKQPPKSAADLDAEMEDYQKAKE
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccatgaatcttgatcgcccattagacgacatcatctctgaaaaacgcaagcaa
cgccgtccggcagctgtcgctcgtcgcggtggtaaagctaaccataccaccgggcccatt
cgacacggtcgcactaccactcgaccccaacctgtcgcgatggcggcccctgcggccaag
atccttcagcttcccgctcaaatgggtcaaggcagcaagatcatcgtgtcgaacttgcct
acagatgtgactgagaatcaaatccgagaacttttctctactactgtcggtccagtgatg
aaagttgccctcagctatgataatcgaggtcaatcaaaaggcacggcccaagtcgaattc
aagagaaatgacgatgccacaaaggcgtttcaacagtacaacaagcgccttatcgaccag
aatcgacccatgaaagtagaaatcatcctcgaccctgctcgcattccacctccgcctttg
tcaactcgcgtggctcctgctcctaagccagctgtttccgtcaggcaagctgctcccgct
gccggtcagccacgtcgaaccggaggcaagccacgaggcaaaaacaacaagcaaccacca
aaatctgccgctgatttggacgctgagatggaagactaccagaaagccaaggaataa
DBGET
integrated database retrieval system