Melampsora larici-populina: MELLADRAFT_71565
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Entry
MELLADRAFT_71565 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K13174
THO complex subunit 5
Organism
mlr
Melampsora larici-populina
Pathway
mlr03013
Nucleocytoplasmic transport
mlr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MELLADRAFT_71565
09122 Translation
03013 Nucleocytoplasmic transport
MELLADRAFT_71565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlr03019
]
MELLADRAFT_71565
03041 Spliceosome [BR:
mlr03041
]
MELLADRAFT_71565
Messenger RNA biogenesis [BR:
mlr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
MELLADRAFT_71565
Spliceosome [BR:
mlr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
MELLADRAFT_71565
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
CC_Bre1
FoP_duplication
Seryl_tRNA_N
DUF7491
Casc1_N
Motif
Other DBs
NCBI-GeneID:
18931859
NCBI-ProteinID:
XP_007408822
JGI:
Mellp1_71565
UniProt:
F4RHX2
LinkDB
All DBs
Position
Unknown
AA seq
209 aa
AA seq
DB search
MNQPELSHLQTLNLISTQLASIATQILNSKLEAGPSNLSSEPDSVNELLPEAASLFATLK
AVNRLSSSTVGDCKSKTNQARAELDSIHLGLQNLVYERRHLEREIKKCHEFESEYQNIAI
HPIEEFVSLMEASGTPVPSDSHELMLARLRYELAERKRFEGEKKELLQRKVKLSKDNDEK
KAKLDELEKQLDQFVISTKEIQAKMAAQA
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaacctgaactatctcatctacaaactctcaacctaatatccactcaattagca
tcaattgccacccaaatcttaaactccaaactagaagctggtccatcaaatctttcatca
gaaccagattcagtcaatgaacttttaccagaagctgcttcactctttgcaaccttaaaa
gctgtcaatcgtttaagttcatcaactgttggtgattgtaaatctaaaacaaatcaagct
cgtgctgaattagattcgattcatttgggtttacaaaatttggtgtatgaacgtcgtcat
cttgaaagagaaatcaaaaaatgtcatgagtttgaatcagaatatcagaatatcgcgata
catccaattgaagaatttgttagcttgatggaagcctctggaacacctgttcctagtgac
tctcatgaactgatgttggcaaggctaagatatgagcttgcagaacggaaaaggtttgaa
ggcgagaagaaagaacttttacaacgtaaagttaaactttcaaaagataacgatgagaag
aaagcgaaattagatgaacttgaaaaacagttggaccaattcgtcatttctactaaagaa
attcaagcgaaaatggcagcacaagcttga
DBGET
integrated database retrieval system