Melampsora larici-populina: MELLADRAFT_72730
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Entry
MELLADRAFT_72730 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
mlr
Melampsora larici-populina
Pathway
mlr03020
RNA polymerase
mlr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MELLADRAFT_72730
09124 Replication and repair
03420 Nucleotide excision repair
MELLADRAFT_72730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mlr03021
]
MELLADRAFT_72730
03400 DNA repair and recombination proteins [BR:
mlr03400
]
MELLADRAFT_72730
Transcription machinery [BR:
mlr03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
MELLADRAFT_72730
DNA repair and recombination proteins [BR:
mlr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
MELLADRAFT_72730
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-GeneID:
18932173
NCBI-ProteinID:
XP_007414104
JGI:
Mellp1_72730
UniProt:
F4RY48
LinkDB
All DBs
Position
Unknown
AA seq
359 aa
AA seq
DB search
MSSAPFSLEPPQSIDGSNLQVKVTELDERHAAFVVEGVDLALANSLRRTIMADLTTVAIH
SVEFEENTSVLPDEMIAHRLGLMPLMSEDLDKYLKNWQRDCTCLSFCDDCSIELVLSVKS
TLPGETLEVTSKDLVITPREDGGDRGDVGKPVQFTLPNGEQPGVLITKLRKGQEVKLKCR
AIKGIAQEHAKWSAVSTIGFEYDPHNRLGHTDLWYEVGTDARAEWPLTKNAKFERPPLDD
EPVDFTTKPSRFYFDVESAGNLRPEDIVVKGIESLIVKLAAVQQGIASALGEGGGPNADG
RNTPYMGTPFGGTGTGLGGGATPGARPDGAAYYGGATPARQVTDWGPPAAPPTHDTGGW
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgtctagcgcacccttctcgctcgaaccacctcaatccattgatggctcaaacttacag
gtcaaggttaccgaattagacgagcgacatgccgcctttgtggttgagggtgttgattta
gcactagccaactcattacgtcgaacgattatggctgatttaacaactgtggcgattcac
tcagtggagtttgaagaaaacacaagtgttcttcccgacgaaatgattgcacatagactt
ggattaatgcctctgatgagcgaagacctcgacaaatatctcaagaattggcagcgagat
tgcacttgtttatcattttgtgacgattgttctatcgaacttgtactctccgtcaaaagt
accttaccaggagagacactcgaggtgactagtaaagatctcgtcatcactccacgagaa
gacgggggcgatcgaggtgatgttggtaaaccagtccagttcaccttacctaatggagag
caacccggggttttgattacgaagctcaggaagggtcaggaagtaaagcttaagtgtcga
gcaatcaagggaatcgcacaagaacatgctaaatggtctgctgtatctacaatcggattc
gagtatgatcctcacaatcgactggggcacactgatctttggtatgaggtcggcacggat
gcccgagccgaatggcctctaacaaagaatgccaaattcgaaagacctcctttggacgat
gaaccagtggattttaccacaaagccatcacgtttctatttcgatgtcgagtctgctgga
aatttgcgccctgaagatattgtggtcaagggcatcgagtcgctgatagtcaagctggca
gccgtacaacagggtattgcttccgctctcggggaaggaggtggacccaatgcagatgga
cgaaatacgccttacatgggcacaccttttggtggcactggaacagggctgggtggtggt
gcaactccaggcgctcgtcctgacggagcagcttactatggtggtgcaacaccagctcgg
caagtaacagattggggaccacctgcggctccacctactcacgatactggaggttggtaa
DBGET
integrated database retrieval system