KEGG   Melampsora larici-populina: MELLADRAFT_72730
Entry
MELLADRAFT_72730  CDS       T03138                                 
Name
(RefSeq) hypothetical protein
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
mlr  Melampsora larici-populina
Pathway
mlr03020  RNA polymerase
mlr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mlr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    MELLADRAFT_72730
  09124 Replication and repair
   03420 Nucleotide excision repair
    MELLADRAFT_72730
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mlr03021]
    MELLADRAFT_72730
   03400 DNA repair and recombination proteins [BR:mlr03400]
    MELLADRAFT_72730
Transcription machinery [BR:mlr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     MELLADRAFT_72730
DNA repair and recombination proteins [BR:mlr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      MELLADRAFT_72730
SSDB
Motif
Pfam: RNA_pol_L RNA_pol_A_bac
Other DBs
NCBI-GeneID: 18932173
NCBI-ProteinID: XP_007414104
JGI: Mellp1_72730
UniProt: F4RY48
LinkDB
Position
Unknown
AA seq 359 aa
MSSAPFSLEPPQSIDGSNLQVKVTELDERHAAFVVEGVDLALANSLRRTIMADLTTVAIH
SVEFEENTSVLPDEMIAHRLGLMPLMSEDLDKYLKNWQRDCTCLSFCDDCSIELVLSVKS
TLPGETLEVTSKDLVITPREDGGDRGDVGKPVQFTLPNGEQPGVLITKLRKGQEVKLKCR
AIKGIAQEHAKWSAVSTIGFEYDPHNRLGHTDLWYEVGTDARAEWPLTKNAKFERPPLDD
EPVDFTTKPSRFYFDVESAGNLRPEDIVVKGIESLIVKLAAVQQGIASALGEGGGPNADG
RNTPYMGTPFGGTGTGLGGGATPGARPDGAAYYGGATPARQVTDWGPPAAPPTHDTGGW
NT seq 1080 nt   +upstreamnt  +downstreamnt
atgtctagcgcacccttctcgctcgaaccacctcaatccattgatggctcaaacttacag
gtcaaggttaccgaattagacgagcgacatgccgcctttgtggttgagggtgttgattta
gcactagccaactcattacgtcgaacgattatggctgatttaacaactgtggcgattcac
tcagtggagtttgaagaaaacacaagtgttcttcccgacgaaatgattgcacatagactt
ggattaatgcctctgatgagcgaagacctcgacaaatatctcaagaattggcagcgagat
tgcacttgtttatcattttgtgacgattgttctatcgaacttgtactctccgtcaaaagt
accttaccaggagagacactcgaggtgactagtaaagatctcgtcatcactccacgagaa
gacgggggcgatcgaggtgatgttggtaaaccagtccagttcaccttacctaatggagag
caacccggggttttgattacgaagctcaggaagggtcaggaagtaaagcttaagtgtcga
gcaatcaagggaatcgcacaagaacatgctaaatggtctgctgtatctacaatcggattc
gagtatgatcctcacaatcgactggggcacactgatctttggtatgaggtcggcacggat
gcccgagccgaatggcctctaacaaagaatgccaaattcgaaagacctcctttggacgat
gaaccagtggattttaccacaaagccatcacgtttctatttcgatgtcgagtctgctgga
aatttgcgccctgaagatattgtggtcaagggcatcgagtcgctgatagtcaagctggca
gccgtacaacagggtattgcttccgctctcggggaaggaggtggacccaatgcagatgga
cgaaatacgccttacatgggcacaccttttggtggcactggaacagggctgggtggtggt
gcaactccaggcgctcgtcctgacggagcagcttactatggtggtgcaacaccagctcgg
caagtaacagattggggaccacctgcggctccacctactcacgatactggaggttggtaa

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