Melampsora larici-populina: MELLADRAFT_75821
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Entry
MELLADRAFT_75821 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
mlr
Melampsora larici-populina
Pathway
mlr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MELLADRAFT_75821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mlr03041
]
MELLADRAFT_75821
Enzymes [BR:
mlr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MELLADRAFT_75821
Spliceosome [BR:
mlr03041
]
Complex C
Other components
Step II factors
MELLADRAFT_75821
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
Motif
Other DBs
NCBI-GeneID:
18932694
NCBI-ProteinID:
XP_007416560
JGI:
Mellp1_75821
UniProt:
F4S5E9
LinkDB
All DBs
Position
Unknown
AA seq
565 aa
AA seq
DB search
MLQREALVDPNLTNYSVIMLDEAHERTIATDVLFGLLKKSIKRRPDLKLIVTSATLDAEK
FSKYFYECPIFTIPGRTYPVEVLYTKEPESDYLDAALITIMQIHISEPPGDILLFLTGQE
EIDTSAEILYERMKALGPHVPELIVLPVYSALPSEMQTKIFEPAPPGARKVILATNIAET
SITIDGIYYVVDPGFVKQKAWDPRLGMDSLVVTPISQAQARQRSGRAGRTGPGKCYRLYT
EAAYRNEMLPTSIPDIQRQNLAHTILMLKAMGINDLLNFDFMDPPPQQTMITALENLYAL
SALDDEGLLTRLGRKMADFPMDPELSKMLIASVDLGCSEEVLTIVAMISGATNVFYRPKE
KQAQADAKKAKFHQPEGDHLTLLAVYDGWKVSKFSNAWCHENYIQARAMRRAQDVRKQLL
GIMDRYKHDIVSCGTNYNRVRRAICSGYFRHAAKKDPQEGYKTLVEGTPVFIHPSSALFN
RAPEWIIYHELVLTTKEYCRDVTAIEPKWLTEVAPTFFKVADAKTMSKRKRNEKVAPLFD
RFAKTENDWRISKVKRSTRTSQTFG
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgttacaaagagaagctctagtggatcctaatcttacgaattattcggtgatcatgttg
gatgaagctcatgagagaaccattgctactgatgtactctttggtctattaaagaaatcg
attaaaagaagaccggatttaaaattgatcgtcacctctgcaacattagatgcagagaag
ttttcgaaatacttttacgaatgtccgatctttacgatcccaggaagaacttatccagtc
gaagttttatataccaaagaacctgaaagtgattatttagatgcagctttgatcacgatc
atgcagattcatatttcagaaccaccgggagacattttattatttttaacaggacaagaa
gagatcgatacatcagccgagattttgtatgaacgaatgaaagccttaggaccacatgta
cctgaattgattgttttaccggtttattctgcattaccatctgagatgcaaaccaagata
tttgaaccagctccaccaggagcaagaaaagtgatcttagctactaatattgctgaaact
tccatcacgattgatgggatttattatgtagtagatccaggatttgtgaaacagaaagca
tgggatcctagattaggaatggattccttggtcgtcacacctatctcacaagcacaagct
agacaaagatcaggtagagcaggtcggactggacctgggaaatgttatagattgtatact
gaagcggcttatcgaaatgaaatgttaccgacttctatacctgatatccaacgtcaaaat
ctggctcatacgatcttaatgcttaaagcgatgggaatcaatgatttgttgaattttgat
ttcatggaccctcctcctcaacaaactatgattactgctttggaaaacttgtatgcttta
tctgctttagatgatgaaggtttattaactcgattaggtagaaaaatggcagattttcct
atggatccagaattatcaaagatgttaatcgcatcagtcgatttaggttgttcagaagaa
gttttaacgattgtagccatgatcagtggagccacgaatgtgttttatagaccaaaagaa
aaacaagcgcaagctgatgcgaaaaaagcaaagtttcatcaacctgaaggtgatcattta
actcttttagctgtttatgatggatggaaagtgagtaagtttagtaatgcttggtgtcat
gaaaattatattcaagcaagagccatgagaagagcacaagatgtaagaaaacaattatta
ggaatcatggatagatataaacatgatatagtgagttgtggaacgaattataatcgggtt
agaagagcgatctgttctggatattttagacatgcagctaagaaagatccacaagaaggt
tacaaaactttagtagaaggtacacctgtttttattcatccttcttctgctttatttaat
agagctcctgaatggattatttatcatgaattagttttaactacaaaagaatattgtaga
gatgtgacggccatcgaacctaaatggttaacagaagtagcacctacattctttaaagtg
gcagatgcaaagacgatgtcgaaaaggaaacggaatgaaaaagtggctccattgtttgat
agatttgcaaagactgagaatgattggaggatatcgaaagttaagagaagtactaggact
agtcaaacttttggataa
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