Melampsora larici-populina: MELLADRAFT_77832
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Entry
MELLADRAFT_77832 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K12882
nuclear cap-binding protein subunit 1
Organism
mlr
Melampsora larici-populina
Pathway
mlr03013
Nucleocytoplasmic transport
mlr03015
mRNA surveillance pathway
mlr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MELLADRAFT_77832
09122 Translation
03013 Nucleocytoplasmic transport
MELLADRAFT_77832
03015 mRNA surveillance pathway
MELLADRAFT_77832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlr03019
]
MELLADRAFT_77832
03041 Spliceosome [BR:
mlr03041
]
MELLADRAFT_77832
Messenger RNA biogenesis [BR:
mlr03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
MELLADRAFT_77832
Spliceosome [BR:
mlr03041
]
Common components
Common spliceosomal components
Cap binding complex
MELLADRAFT_77832
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
DUF1319
HNF-1_N
Motif
Other DBs
NCBI-GeneID:
18933008
NCBI-ProteinID:
XP_007410251
JGI:
Mellp1_77832
UniProt:
F4RMF2
LinkDB
All DBs
Position
Unknown
AA seq
1024 aa
AA seq
DB search
MVQVVMLMIYLPTIDFRNSTVELPHKLPHYALLIALLSTPAVTKPTETPIGLQVIRELGR
AFQQHIDNRRWRSTRLCVQLFGQLNSLQRPLVSDRSLLAILQAFVRVLSDELTCSISRAD
ECVRIATEGLVRSGLWVRFGPNSEDHSKPLNLDEPSKTVGTSNAEHQAIKSDGDDKAMDV
DSSNTQPGDTTATDTEKPDLGESKEPESDELKAITTDQSADMTKDSKTDDIDATKTEKTL
SPEQEAERAKEIADIRTGVTQLVDAIKTHMSNRKIDRSLFNQATALNQYTDVGTLRTRLS
IFTTPIEELVAALDEPTISVLPILDSPFSPLIEARMKSYSGVDVQYPSPVDLPVVLLPPE
NDDDELEDRPVVSVNVAAHHHSSNSAAPGRPLSADSKDRIGYTGVRMFLKMFVDNSVPSR
STADGVVLRTLIHDIIDIFEVNRKECAKILLELPRWVGRGTFKSKATKDVAETDGGPGWV
LEHSIIETIVSSIFGMPRPPIKPSVYYSSLIAELCKLSPSTVAPALGKCMRRLFGGLGAK
KDTTDDEENTTIVVLEAEAIRRFADWFAVHLSNFGFLWVWKDWTEVTELEVDHPKRVLVS
RILELELRLSYYDRIVGTVPASYVESGVMAGKAPGPVFVFEDKASSDIVQLLKRKEPVSR
LLEYLKKMVERFEGEEGMNGSEALSIQHQLTIEAILFVGSRSFSHFLNVLERYTELLKKM
TESKESRRLTLKSVTRVWKNNPQFELIVYEKLMEYRLIDPIDLIQHFFDHEETGEEEEKN
GKKRREIKFWDGIRLSIGMVKNRVGIARVRVNRMKKEDEDEMDLVRAAAGNGDNGNDPDG
NMTGDKEMEDIPKAEEMSKEGETLKESDASKDGEVPKEGEGLKEGQETKEENESEITKES
EVLKEEEMKKLKRIEREKSLESKISELNSEIKELIEVFLEVVKLFGKELEDISKEEEEEE
MNGKEDWGKWWVEGWTREFCRLFGNEIVEHYEVLFKEVEELKLNKMKRYLELTKEWIENI
GKVY
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atggtgcaggtggtaatgctaatgatatacttaccaaccattgactttcgaaacagtacg
gtggagcttccccataaattaccacactatgcactcctcatagccctcctttctactcct
gcagtcactaaacctacggaaactccaatcggattacaagtcatccgtgaattaggcaga
gcttttcaacaacacattgataatcgtagatggagatcgactagactatgtgttcaactc
ttcggacaactcaattcattacagagaccactcgtttctgatcgatcattattagctatc
cttcaagcctttgttcgagtcttgtctgatgaattaacttgctcgatctctcgggctgat
gaatgcgttcggattgctaccgaaggtttagtgaggtctggactttgggtcaggtttggt
ccaaattcggaggatcattcgaaacctctcaatctagatgagccatctaaaaccgttggt
acatcaaacgccgaacatcaggctatcaagtcagatggcgatgacaaagctatggatgtt
gactcgtccaacactcaaccgggggatacaacagctacagacactgaaaagccagacctt
ggggaatcgaaagaacctgaatctgacgaacttaaagctatcacgactgaccagtccgcc
gatatgaccaaggactctaaaactgatgatatcgacgcaaccaaaactgaaaaaactttg
agcccagagcaagaagctgaacgggcaaaagaaatagccgatatacggactggagtcaca
caattagttgatgccatcaaaacgcatatgtccaatcgtaaaattgaccgatcgctcttc
aatcaagcaactgctctgaatcaatataccgatgttggtactttacgcacgcgcttatcc
atcttcactactccaatcgaggaacttgtagcagcacttgacgagcctaccatcagcgtc
ttaccaatcctcgatagtccattctcacccctaattgaagctaggatgaaatcttacagt
ggggtggatgtacaatacccttctccggttgatttacctgttgttttattaccacctgaa
aatgatgatgatgaacttgaggacagaccagtggtgtcggtcaatgtcgcggctcaccat
cattcgtcgaactctgcggctcctggacgtcctctttcggccgattcaaaagataggata
ggctatacaggtgtcagaatgttcttgaagatgtttgttgacaatagcgttcctagtcgc
agcacagcagatggagtggtcctaaggactctgatacacgatatcattgacatctttgaa
gttaatcgcaaagaatgtgctaagattttactcgaattacctagatgggtaggaaggggg
acttttaagagcaaagcgactaaggatgttgctgagacggacggcggcccaggttgggtc
ttggaacactcgatcattgagaccattgtcagctcgatattcggaatgccaagaccacca
atcaaaccatcggtttattattccagtctaattgcagaactttgtaaattgtcgccatcg
accgtcgcaccagccttggggaaatgtatgagaaggttatttggggggttaggagcaaaa
aaagatacaacagatgatgaagagaatactacgattgtagttctagaggctgaagctatc
agaaggtttgcagattggttcgcagtccatttatcgaattttggattcctatgggtttgg
aaggattggacggaagtcacagaattagaagttgatcatccaaaacgagttttggtttca
agaatcttggaacttgagctcagattaagttattatgatcgaattgttggtactgttcca
gctagttatgtggaatcgggagtaatggctgggaaagctccaggaccagtatttgtattt
gaagacaaagctagttcagatatagttcaactattaaaacgtaaagaaccggtgagccga
ttgttagagtatttaaagaagatggtagaaagatttgaaggtgaagaaggcatgaatgga
tctgaagcactttctattcaacatcaattgacaattgaagctatcctttttgttggatca
agatctttttcacatttcttaaacgttttggaaagatatacagaattgttaaagaagatg
actgaatcaaaagagagtagaaggttaacattaaaaagtgtgacaagggtttggaaaaat
aatccacaatttgaattaatcgtatatgagaaattaatggaatatagattgatagatccg
attgatttaattcaacatttctttgatcatgaagaaactggagaagaagaagagaaaaat
ggaaagaagagaagagaaataaagttttgggatgggatcaggttatcgattggcatggtg
aagaatcgagtagggattgcaagagttagagtgaaccgaatgaagaaggaagatgaagat
gaaatggatttagttagagctgctgctgggaatggagataatggaaatgatccagatgga
aatatgaccggtgataaagaaatggaagacatacctaaggcagaagaaatgtctaaagaa
ggagaaacacttaaagaaagtgatgcatctaaagatggagaagtacctaaagaaggagaa
ggacttaaagagggacaagaaactaaagaagaaaacgaatcggaaatcacaaaagaatcg
gaagttttaaaagaagaagaaatgaaaaagttaaaaaggatcgaaagagaaaaatcattg
gaaagtaaaatctctgaattgaattcggaaattaaagaattgattgaagtgtttttagaa
gtggtcaaattgtttggaaaagaattggaagatattagtaaagaagaagaagaagaagaa
atgaatggaaaggaagattggggaaagtggtgggttgaaggttggactagagagttttgt
agattatttggaaatgaaattgtagaacattatgaagttttatttaaagaagttgaagaa
ttaaaattaaataagatgaaaaggtatttagaattaactaaagaatggattgaaaatatt
ggaaaagtttattaa
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