Melampsora larici-populina: MELLADRAFT_77838
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Entry
MELLADRAFT_77838 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K15176
RNA polymerase-associated protein CTR9
Organism
mlr
Melampsora larici-populina
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mlr03021
]
MELLADRAFT_77838
Transcription machinery [BR:
mlr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
MELLADRAFT_77838
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_19
TPR_1
TPR_8
TPR_12
TPR_16
TPR_14
TPR_Slam
TPR_11
ARM_TT21_5th
TPR_6
ARM_TT21_N
TPR_4
ARM_TT21
Kbp-5
Motif
Other DBs
NCBI-GeneID:
18933009
NCBI-ProteinID:
XP_007410261
JGI:
Mellp1_77838
UniProt:
F4RMH4
LinkDB
All DBs
Position
Unknown
AA seq
1102 aa
AA seq
DB search
MASDLPSSAYRILDVPLNNNTESLELDLDEICGGEGSVDEIVGIFVGEKLSVKYWTRGVM
EYWRRDLREDGVSLGEQGLQGRSEECLPLLCQLVTGLICLAKNLPTMKLETASYDLLPDA
QPIKEVYLSRALLYVNEATAIDPKNPLVLDARAKKEFDQVFNTCEQILKDKPTHLPALLA
KARVLFHRKYYRPALKIYQQILSHAPMFLPDPRIGIGCCFWFLGETSMAKKAWQRSIAVH
PGKASQSAQVLLGLVNFHASRDIHLSDEAKLSAYQEGMSYIQGTFKTNRNIAISAAVLAS
HFLTANNWATVSFEGPHLVWATKMAERAVQYADANPILVEARLVLARAFHAQGKLVEAQK
EYQAAITLDRSVLNPVLGVAQIMVAQNEYVPAINTFENVLRRQPRCIEALVNLAALRTHL
AFTSSSSTEAAAEKTKARDLYEQITRLFATRIKKPGAAPQDPGIMPPRIREVASDPDLYI
DIARLSTDTDIGRALKGYCQSLAVRKDLEKPIPAMLFNNIGVLEWKNGNLRESQEQIESA
LAATASAVVGDETERETNERAAVCMLYNLGVVCEDTGEKEKAKDIYERILIRHPEYVDAK
ARLALMHLSHRNFDKANGLLKEALTSQTGNGELRALYTYFLIESNQIKQARDFSVATLKD
HDKQDIYALCASGALLYTQARENKDPGPEASMERANRFFRAAEFFEKAIQLDHHCAFAAQ
GLAIALAEHVIGGASMGSQNGQSSGTDGNAIRAKNIRDAITIFTKVKEAVNDGSVYVNLG
HCYYLRDEFERSIENYNTASKRFYQGKNIPVLLYLARAWFQKASKDQSFVSLRNALTNAQ
AAQELNPRDAATAFNVALIQQKGLELLLDLDAAKRTLSDIKIAIADAQAAQEAFATLASQ
KPGSVPFETDIAHQRKRYGESLLRRTAEIQDAQQEYESTESAKIERARQEREAERQRIAE
AELSRLQEMAAKNEELARKRQEMQESAASWYVKRESDNESDGGKKKKKQGGAKRKTKESG
VTIVDDGDLNEEGTDIEEKKPKRKRTKKQKDRENDTPARGVRAVSTADDENESDDGPTLK
PNGKRKSNKIYKSAEFVEDDSD
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgacttaccatcttcagcatatagaattttggatgtaccactcaataacaat
accgaatctcttgaacttgacttggatgaaatttgtggtggcgaaggttctgtggatgaa
atcgttggaatttttgtaggagaaaaactttcagttaaatattggacgagaggtgtgatg
gaatattggaggagagatctaagagaggacggtgttagcttgggagaacaaggattacaa
gggagatccgaggaatgtctaccactcctttgccagctcgtcactggtctaatatgtctg
gcgaagaacctaccgacgatgaaactagagacggcttcatacgatctcttacccgatgct
caacctatcaaagaggtttatctgtccagggctctactgtatgtgaatgaagccacagcg
atcgatcccaagaatccactggtgctcgatgcgagagccaaaaaggagttcgaccaggta
ttcaatacgtgtgaacaaatcttgaaggacaagccgactcatctaccggcactattagcc
aaggctcgggtactttttcatcgcaagtactatcgaccagccttgaagatctaccagcag
atcctcagtcacgccccgatgttcttgcccgacccaaggattgggattgggtgctgtttt
tggttcctgggtgaaacctccatggcaaagaaagcatggcaaagaagcattgcggtgcat
ccaggtaaagcttctcagagtgctcaagtcctcttgggtctggtcaattttcatgcatct
cgtgatatccatctatccgatgaggccaagttgtcggcctatcaagaaggaatgtcatac
attcaaggtaccttcaagacaaatcgtaacatagctatctctgccgcggtccttgccagt
cacttcttgacggccaacaattgggctactgtcagttttgagggacctcatctcgtctgg
gctacaaaaatggcagaacgggctgtacagtatgctgatgcgaatcctatccttgtcgaa
gctcgcttggttctggccagagcttttcacgctcaaggtaaactggtagaggctcagaaa
gagtatcaagctgcaatcaccctggatcggtccgtcttgaacccagtcttaggagtcgcg
cagataatggttgcgcagaatgagtatgtaccggcaatcaacacatttgaaaatgtttta
cgccggcaaccacgatgtatcgaagcattagtgaatctagccgcacttcgaactcatctg
gcctttacatcgagctcttcaacagaagcagccgccgaaaagaccaaagctcgagatctt
tatgagcaaatcacaagactctttgccacccggatcaaaaaacctggcgctgcccctcaa
gaccctggcatcatgcctccacggatcagggaagtagccagcgatcctgacctctatatt
gatattgctcgattatccacggataccgatattggtcgagcactgaaaggctactgtcag
tcgctcgctgtcaggaaagacttggagaaaccgatacctgccatgttgttcaacaatatc
ggcgtcttagaatggaaaaacggaaacctaagagaatctcaggagcagatcgagagcgca
ttggcagcaaccgcgagcgctgtggtgggcgatgaaacggagagggaaactaatgaaagg
gctgcagtatgtatgctgtacaacttaggggtggtctgtgaagacacaggggagaaagaa
aaggctaaggacatctacgaaaggattttgattcgacatcctgaatatgttgatgcgaaa
gcacggctagcgttgatgcatctgtcgcataggaactttgacaaagcaaatggcttacta
aaggaagccttgacgtctcaaaccggaaatggcgagttgagagccctctatacttacttt
ctaatcgaatcgaatcagatcaagcaagctcgagatttctcagttgcgacgctcaaggat
cacgacaagcaagacatatatgctttatgtgcatctggtgctttgctatatacccaagct
cgcgaaaacaaagacccaggtcccgaagccagtatggaacgtgccaacaggttttttcgt
gcagcagaattttttgagaaagctattcaacttgatcatcattgtgctttcgctgcacaa
ggtttggcgattgctttggcggagcatgtcatcggtggtgcttctatgggaagccagaat
ggacaaagctcgggaacggatggaaatgctatcagagcgaagaacattcgagatgcaatc
actatattcacaaaggtgaaggaagctgtaaatgatggcagtgtttatgtcaatttagga
cattgttattatcttcgggacgaatttgaacgctcaatagagaactacaacacggcatcc
aaacgattttaccagggtaaaaatatcccggttttactctatctagctcgagcttggttt
caaaaagctagcaaagatcaaagctttgtttcgctacgtaacgctctaacgaatgctcag
gctgcccaggaactcaatccacgggatgcagccactgcattcaatgtagccttgatccag
caaaagggccttgaacttttgcttgatctggacgcagctaaacggacactttctgatatc
aaaatcgccatcgcagatgctcaggcggctcaagaggcatttgctacgttagctagtcag
aaacctggaagtgtgccttttgagacggatattgcacatcagcgaaagcggtacggtgaa
agtttattacgacgaactgcagagatacaagacgcacagcaagagtacgaatctactgag
tctgccaagatcgaacgagctcgccaggaacgagaagctgagagacaaagaatcgcagaa
gctgagctctcccgattgcaagagatggcggctaaaaatgaagaacttgcacgtaaacga
caagaaatgcaggaatctgctgcatcgtggtatgtcaaacgcgagagcgataatgagagc
gatggcggtaagaagaagaagaaacaaggaggcgccaagcgaaagacgaaggaaagtgga
gtaactattgttgatgatggtgatctcaacgaagaaggaacagatattgaggaaaagaaa
cctaaacgcaagcgtacgaagaaacagaaagaccgagagaatgatacgccggctcgcgga
gtcagggctgtctcgacggctgatgatgaaaatgaatctgatgacgggccgacattgaaa
cccaatgggaagcggaagtcgaacaaaatttataaaagtgcagaatttgtcgaagacgac
agcgactga
DBGET
integrated database retrieval system
