Melampsora larici-populina: MELLADRAFT_78308
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Entry
MELLADRAFT_78308 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
mlr
Melampsora larici-populina
Pathway
mlr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MELLADRAFT_78308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mlr03021
]
MELLADRAFT_78308
Transcription machinery [BR:
mlr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
MELLADRAFT_78308
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
18933093
NCBI-ProteinID:
XP_007412186
JGI:
Mellp1_78308
UniProt:
F4RSU9
LinkDB
All DBs
Position
Unknown
AA seq
700 aa
AA seq
DB search
MSNQPRNQSTSQRPSASTGPAPMDTDPKSPPKAAPTYTDYRLVSAFDPNVKNNILKFAPS
SKKVVNFDTFVGPVKLNRKDPWMIRKKAEEEKRKEQEIKLKGEIKDEDNVGMNELNSTND
TKEGITNKNGRDDTLIAPGSGSQPRVKATAFKKKTKQVFIAADQTARMLRKEEYQSWLLE
DGAMTGSERWIGRYESAGAAAGSSENASSALTRASPNDAPNYVVFRLNEAGEYFQVLPCH
RFYRFTQRPNYDTLGADEAEAAYEKMQKPTTKEDVGRWFMRRRGAAGPSGPSPASHPVKR
EGSVKPSILDDSKLSFGPQSTRPQVEVISHVNGRRGNFTAVHGANSRRNDEDEDEKPHLG
QEGDFDEFDFNEDFADDEEGAGNLNDEAMEEDELKELEERMKKEMLAAGRAGDEERTRQD
MDLDKEDDDKEDLTKEGKAVKKLLMRKTDNEFYESDDEVKNPYASEEDESDFEEVIPPPA
PAVPSPTDSKTVPSSRAGTPGPSSNNPTSSQRNPSKLVPQKPTNLKIDKTQSRPPSRSGT
PSLGTQSRAISPHPTVGTSNMAKPLSRANSPQPLSAGGKSTLSRTASPVQASTKPSTPTS
GVGASSGLKRKHPGGVGGKEKRPNPGINSTPGSPLPDQGVGLMTEQEVINLLRNRPISTK
ELLSHFKLRLKEDRNKVMVFKIIKSVAQMSNGLLVLKDGL
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaccagccacgaaaccaatcaacttctcaacgaccttctgcctctacaggtcca
gctccgatggatactgaccctaaatcaccacccaaagctgctcctacatacacagactat
cgcttggtttccgctttcgatcctaatgtcaagaacaacatattgaaatttgcaccctcc
tcaaaaaaagttgtcaattttgatacatttgttggtccggtgaagctgaatcgtaaggat
ccttggatgataagaaagaaagctgaagaggagaaacgaaaggaacaagaaatcaaattg
aaaggcgaaatcaaagatgaagataatgttggaatgaatgaacttaattcgacaaatgat
acaaaggaaggaataacaaataagaatggacgagacgatactttgattgctcctggatct
ggatctcaaccacgagtaaaagctacagcattcaaaaagaaaaccaaacaagtcttcatc
gctgccgatcaaaccgctcgtatgttaagaaaagaagagtatcagtcttggctattggaa
gacggtgcaatgaccggatctgagcgttggattgggcggtacgaatctgctggtgctgct
gccgggtctagcgagaatgccagtagcgcgttaactagggcttctcctaacgatgcaccc
aattatgtcgtattcagattgaatgaagccggtgaatactttcaagtactaccctgtcat
cggttctatcgatttactcagcgtccaaactatgacacgttgggtgcggatgaagctgaa
gctgcgtacgagaagatgcaaaaacctacaacaaaggaggacgtgggacgatggtttatg
cgccgtcgtggtgccgctggccctagtggtccttctccggctagtcatcctgtgaaacgt
gagggcagcgttaaaccttctattttggacgactcgaaactctccttcggaccccaatca
actagaccgcaggtcgaagtcatttcgcatgtcaatggccgccgaggaaactttacggct
gttcatggtgcaaactcacgaaggaacgatgaagatgaagacgagaaacctcacctggga
caagagggtgactttgacgagtttgacttcaatgaagactttgcagatgacgaagaggga
gcaggtaacttgaatgacgaagccatggaggaagatgaattgaaagaattggaggaacgt
atgaaaaaagaaatgttggctgccggtcgtgcgggagatgaagaacgtacgaggcaagac
atggacttggacaaggaagacgatgacaaagaagatttaacaaaggaaggcaaggcggtc
aagaaattattgatgcgtaaaacggacaatgaattttacgagagtgatgatgaggtcaag
aatccctacgcttcagaggaggatgagtctgatttcgaagaggtcatacctcccccagca
ccagcggttccaagccccacagattctaaaacagtaccttcatctcgcgcaggtacgcct
ggtccgagctccaataaccccacatctagccagcgcaatcctagcaagcttgtaccccag
aaaccgaccaatctcaagattgacaaaacacaaagtcgaccaccctcccgttctggaact
cctagccttggtactcaatctcgtgctatctcgccacatccaactgtcggaactagtaac
atggccaaaccactctcacgtgccaatagtcctcagccacttagcgcaggtgggaaatct
accctcagtcggacagcttctcctgttcaagcctctactaagccttcaacacccacctca
ggtgttggtgcttcttctggactcaagcgaaaacacccaggtggggtaggtggtaaagag
aagcgacctaaccctggtatcaactctacgcctggttcacctttacctgatcaaggagta
ggtttgatgaccgaacaagaagtgatcaacttattaagaaatcgaccaatctcgactaaa
gaactcttatcacacttcaaattaagattgaaagaagatcgtaataaggtcatggtattc
aaaattatcaagagtgtggcccaaatgtcgaacgggctacttgtgctcaaggatggtctt
tga
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