KEGG   Melampsora larici-populina: MELLADRAFT_78308
Entry
MELLADRAFT_78308  CDS       T03138                                 
Name
(RefSeq) hypothetical protein
  KO
K03138  transcription initiation factor TFIIF subunit alpha
Organism
mlr  Melampsora larici-populina
Pathway
mlr03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:mlr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    MELLADRAFT_78308
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mlr03021]
    MELLADRAFT_78308
Transcription machinery [BR:mlr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIF
     MELLADRAFT_78308
SSDB
Motif
Pfam: TFIIF_alpha
Other DBs
NCBI-GeneID: 18933093
NCBI-ProteinID: XP_007412186
JGI: Mellp1_78308
UniProt: F4RSU9
LinkDB
Position
Unknown
AA seq 700 aa
MSNQPRNQSTSQRPSASTGPAPMDTDPKSPPKAAPTYTDYRLVSAFDPNVKNNILKFAPS
SKKVVNFDTFVGPVKLNRKDPWMIRKKAEEEKRKEQEIKLKGEIKDEDNVGMNELNSTND
TKEGITNKNGRDDTLIAPGSGSQPRVKATAFKKKTKQVFIAADQTARMLRKEEYQSWLLE
DGAMTGSERWIGRYESAGAAAGSSENASSALTRASPNDAPNYVVFRLNEAGEYFQVLPCH
RFYRFTQRPNYDTLGADEAEAAYEKMQKPTTKEDVGRWFMRRRGAAGPSGPSPASHPVKR
EGSVKPSILDDSKLSFGPQSTRPQVEVISHVNGRRGNFTAVHGANSRRNDEDEDEKPHLG
QEGDFDEFDFNEDFADDEEGAGNLNDEAMEEDELKELEERMKKEMLAAGRAGDEERTRQD
MDLDKEDDDKEDLTKEGKAVKKLLMRKTDNEFYESDDEVKNPYASEEDESDFEEVIPPPA
PAVPSPTDSKTVPSSRAGTPGPSSNNPTSSQRNPSKLVPQKPTNLKIDKTQSRPPSRSGT
PSLGTQSRAISPHPTVGTSNMAKPLSRANSPQPLSAGGKSTLSRTASPVQASTKPSTPTS
GVGASSGLKRKHPGGVGGKEKRPNPGINSTPGSPLPDQGVGLMTEQEVINLLRNRPISTK
ELLSHFKLRLKEDRNKVMVFKIIKSVAQMSNGLLVLKDGL
NT seq 2103 nt   +upstreamnt  +downstreamnt
atgagcaaccagccacgaaaccaatcaacttctcaacgaccttctgcctctacaggtcca
gctccgatggatactgaccctaaatcaccacccaaagctgctcctacatacacagactat
cgcttggtttccgctttcgatcctaatgtcaagaacaacatattgaaatttgcaccctcc
tcaaaaaaagttgtcaattttgatacatttgttggtccggtgaagctgaatcgtaaggat
ccttggatgataagaaagaaagctgaagaggagaaacgaaaggaacaagaaatcaaattg
aaaggcgaaatcaaagatgaagataatgttggaatgaatgaacttaattcgacaaatgat
acaaaggaaggaataacaaataagaatggacgagacgatactttgattgctcctggatct
ggatctcaaccacgagtaaaagctacagcattcaaaaagaaaaccaaacaagtcttcatc
gctgccgatcaaaccgctcgtatgttaagaaaagaagagtatcagtcttggctattggaa
gacggtgcaatgaccggatctgagcgttggattgggcggtacgaatctgctggtgctgct
gccgggtctagcgagaatgccagtagcgcgttaactagggcttctcctaacgatgcaccc
aattatgtcgtattcagattgaatgaagccggtgaatactttcaagtactaccctgtcat
cggttctatcgatttactcagcgtccaaactatgacacgttgggtgcggatgaagctgaa
gctgcgtacgagaagatgcaaaaacctacaacaaaggaggacgtgggacgatggtttatg
cgccgtcgtggtgccgctggccctagtggtccttctccggctagtcatcctgtgaaacgt
gagggcagcgttaaaccttctattttggacgactcgaaactctccttcggaccccaatca
actagaccgcaggtcgaagtcatttcgcatgtcaatggccgccgaggaaactttacggct
gttcatggtgcaaactcacgaaggaacgatgaagatgaagacgagaaacctcacctggga
caagagggtgactttgacgagtttgacttcaatgaagactttgcagatgacgaagaggga
gcaggtaacttgaatgacgaagccatggaggaagatgaattgaaagaattggaggaacgt
atgaaaaaagaaatgttggctgccggtcgtgcgggagatgaagaacgtacgaggcaagac
atggacttggacaaggaagacgatgacaaagaagatttaacaaaggaaggcaaggcggtc
aagaaattattgatgcgtaaaacggacaatgaattttacgagagtgatgatgaggtcaag
aatccctacgcttcagaggaggatgagtctgatttcgaagaggtcatacctcccccagca
ccagcggttccaagccccacagattctaaaacagtaccttcatctcgcgcaggtacgcct
ggtccgagctccaataaccccacatctagccagcgcaatcctagcaagcttgtaccccag
aaaccgaccaatctcaagattgacaaaacacaaagtcgaccaccctcccgttctggaact
cctagccttggtactcaatctcgtgctatctcgccacatccaactgtcggaactagtaac
atggccaaaccactctcacgtgccaatagtcctcagccacttagcgcaggtgggaaatct
accctcagtcggacagcttctcctgttcaagcctctactaagccttcaacacccacctca
ggtgttggtgcttcttctggactcaagcgaaaacacccaggtggggtaggtggtaaagag
aagcgacctaaccctggtatcaactctacgcctggttcacctttacctgatcaaggagta
ggtttgatgaccgaacaagaagtgatcaacttattaagaaatcgaccaatctcgactaaa
gaactcttatcacacttcaaattaagattgaaagaagatcgtaataaggtcatggtattc
aaaattatcaagagtgtggcccaaatgtcgaacgggctacttgtgctcaaggatggtctt
tga

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