Melampsora larici-populina: MELLADRAFT_78533
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Entry
MELLADRAFT_78533 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
mlr
Melampsora larici-populina
Pathway
mlr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MELLADRAFT_78533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlr03019
]
MELLADRAFT_78533
Messenger RNA biogenesis [BR:
mlr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
MELLADRAFT_78533
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
18933127
NCBI-ProteinID:
XP_007413065
JGI:
Mellp1_78533
UniProt:
F4RVG0
LinkDB
All DBs
Position
Unknown
AA seq
378 aa
AA seq
DB search
MDEDEAFLYGDDEVTTEPKNGITQSSSDAPPPVFKSTFEAVSRISATPELSEKPLAVETT
SIPPLPPPIADIEQNVPNPFLNPAKSTEDITSDLESNGELEVNQEPDEDDDQEVEEEDSD
DDLHIILEGDGTHLHSAPNARASVSTSRPEIPRESPAQPRAIDSTNATTEYKILERIEGK
PAEPSTPGPAKPAPSISHNSYRNPYELPTHNRLPTPENFPRPATPPHDSSLGDQQPPINS
EAPVPLTGYDDKDGTTLMNFDFDAIPESEKGWKKPGAHVADWFNYGFDETTWRWYVMKQK
RHRADESWAANPFAAFATGNIQEAWDTLPSELKGIMMQTIMGPNAGTNGNHGPPMPPPPM
PQMMVMNPMMQGMDMGGF
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagacgaggcctttttgtatggagatgatgaagtcaccactgagccaaagaac
ggtataacacaatccagttcagacgctccacccccagttttcaaatctacattcgaagca
gtctccagaatatctgctacgcctgaactatcggaaaagcccctcgctgtcgaaaccacg
agtattcctcctcttccgccaccgattgccgatatcgagcaaaatgtcccaaatcctttt
cttaaccctgctaaatccacagaggacattacaagcgacctagaatcaaatggggagcta
gaggtcaaccaggaacctgatgaggatgacgaccaagaggtagaggaggaagactcggat
gacgatttgcacatcattctggaaggcgacggcacacatctacacagtgctccaaatgca
agggcctcggtttcgacgtcaagacctgaaattccccgcgaatcaccggcacaacctcga
gcaatagactccacaaacgctaccactgaatacaaaatcctcgaacgcatcgaaggaaaa
ccagccgaaccatctactcctggacccgcaaagcctgctccatctataagtcacaattca
taccgtaacccttacgagctccctacccataatcgactccctacccctgaaaattttccc
agacccgcgactccgccccacgattcctctctgggagatcagcaaccaccaatcaactcc
gaagcgcctgtccccttgacaggctatgatgacaaagacggtacaacattgatgaacttt
gacttcgacgcaattccagaaagcgagaaaggatggaaaaaaccgggtgcgcatgtcgct
gactggtttaactatggattcgatgaaactacatggcggtggtacgtgatgaaacagaaa
aggcatcgggcggacgaatcctgggcggccaatcctttcgccgcttttgcgactgggaac
attcaagaggcttgggatacgctgccgtctgaactcaaaggcatcatgatgcaaacgatt
atggggcccaatgctggaacaaatggcaatcatggaccgccgatgccaccaccgccgatg
ccacaaatgatggtgatgaacccaatgatgcaaggcatggatatgggtggattt
DBGET
integrated database retrieval system