Melampsora larici-populina: MELLADRAFT_78893
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Entry
MELLADRAFT_78893 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
mlr
Melampsora larici-populina
Pathway
mlr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MELLADRAFT_78893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mlr03041
]
MELLADRAFT_78893
03009 Ribosome biogenesis [BR:
mlr03009
]
MELLADRAFT_78893
Enzymes [BR:
mlr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MELLADRAFT_78893
Spliceosome [BR:
mlr03041
]
Complex A
U1 snRNP components
U1 related factors
MELLADRAFT_78893
Complex B
MELLADRAFT_78893
Ribosome biogenesis [BR:
mlr03009
]
Eukaryotic type
Pre-60S particles
Helicases
MELLADRAFT_78893
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF2443
Cas3-like_C_2
Utp25_C
Motif
Other DBs
NCBI-GeneID:
18933183
NCBI-ProteinID:
XP_007414813
JGI:
Mellp1_78893
UniProt:
F4S084
LinkDB
All DBs
Position
Unknown
AA seq
537 aa
AA seq
DB search
MSYGGYSGGSGSYGGGGGGYGASSGGYGGGGGGYGGGGGGGGGGDRMSGLGSGLGRPKWD
TTTLSRFEKNFYEEDPRVTGRSDREIDQYRKDKEIQIFGKNIPKPVSNFSEAGFPDYIMA
EIRKAGFTEPSPIQCQAWPMALSGRDVVAISATGSGKTIAFSLPAMIHINAQPLLAPGDG
PIVLILAPTRELAVQIQGECTKFGASSRIRNTCVYGGVPKGQQIRDLSRGAEIVIATPGR
LIDMLESRRTNLQRVTYLVMDEADRMLDMGFEPQIKKILEQIRPDRQTLMFSATWPKEIQ
RLANEYLKDFIQVNVGSLELTANVNITQIVEVCSDFEKKGKLIKHLEKISAESAKVLIFV
GTKRVADDLTKYLRQDGWPSLAIHGDKQQTERDWVLGEFKSGRSPIMIATDVASRGLDVK
DVAYVINYDMPNGIEDYIHRIGRTGRAGRTGTAYSYISADQGKLARELVKILQDAKQVVP
PALVELSSFGGGGGGGRRGGGGYGGGRGGGGGRYGGGATGANSYGMGGGGGGGSSRW
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacggtggctatagtggaggatctggtagctatggtggtggaggtggtggttac
ggggccagctctggtgggtatggtggtggtggcggaggttacggtggtggaggtggtgga
ggcggaggtggtgatcgaatgtctggtctcggtagtggtctcggccgccccaagtgggac
actaccaccttatctcgtttcgagaaaaacttctatgaagaagacccacgtgtgacaggt
cgctcagatcgcgagatcgatcagtaccgtaaagacaaagagattcaaatctttggcaaa
aacatccctaaaccagtctctaacttcagtgaggctggtttcccagactacatcatggcc
gagatccgcaaggctggctttaccgaacctagtcctattcaatgccaagcctggccgatg
gccctcagtggtcgtgatgtggtggctatcagtgctaccggatctggaaagaccattgct
ttttcacttcccgcgatgattcacatcaacgctcaacccctccttgctcctggagatggt
ccgattgtcttgattctcgctcctactcgtgagctggctgtccagattcaaggcgagtgc
accaagtttggcgcatcatctcgtattcgaaacacatgtgtgtacggtggtgtaccaaag
ggtcaacagattcgagacctcagccgcggtgccgaaattgtcatcgctactcccggtcgt
ctgatcgatatgcttgagtcgcggcggaccaatcttcagcgggtcacttaccttgtcatg
gacgaagctgatcgaatgttggacatgggtttcgagccacaaatcaaaaagattctcgaa
caaatcaggcctgatcgacaaaccctcatgttttccgccacctggccaaaagaaattcaa
cgtcttgcaaatgaatacttgaaagattttattcaagtcaatgtcggtagtctagagctt
acggccaacgtcaacatcactcagatcgtcgaagtgtgtagcgatttcgaaaagaagggc
aaactgatcaagcatctcgagaagatttccgctgaatccgccaaggtcttgatctttgtg
ggtaccaagcgtgtggccgacgatttaaccaagtatctccgacaggatggatggccttct
cttgctattcatggtgacaagcaacaaactgagcgtgattgggtgctcggagagttcaag
agcggcaggagccctatcatgattgccactgatgtcgcttctcgtggtttagacgtgaaa
gatgttgcgtatgttatcaactacgacatgccaaatggtattgaagactacattcataga
attggtcgtaccggtcgtgccggtcgaacaggaactgcctacagttacatcagtgccgac
caaggcaagctggcccgtgaattggtcaagatcctccaagacgccaaacaagtcgtacct
cctgcgttagttgagttgtcctcatttggtggtggtggaggcggaggtcgtcgtggtggc
ggtgggtacggtggcggtcgaggtggtggtggtggccgttacggtggtggtgcgaccggt
gccaattcatacggaatgggtggtggtggtggtggtggatcatcacgctggtga
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integrated database retrieval system
