Melampsora larici-populina: MELLADRAFT_79059
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Entry
MELLADRAFT_79059 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
mlr
Melampsora larici-populina
Pathway
mlr03013
Nucleocytoplasmic transport
mlr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
MELLADRAFT_79059
03015 mRNA surveillance pathway
MELLADRAFT_79059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlr03019
]
MELLADRAFT_79059
03041 Spliceosome [BR:
mlr03041
]
MELLADRAFT_79059
Messenger RNA biogenesis [BR:
mlr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
MELLADRAFT_79059
Spliceosome [BR:
mlr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
MELLADRAFT_79059
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
DUF1003
Motif
Other DBs
NCBI-GeneID:
18933210
NCBI-ProteinID:
XP_007415598
JGI:
Mellp1_79059
UniProt:
F4S280
LinkDB
All DBs
Position
Unknown
AA seq
452 aa
AA seq
DB search
MGDAGFFKGTSSEQDTRFKDKEKSLLKSINFPKELDKKVDMRKVEMTVMRPWIAQKVMDL
LGFEDEVVVEYVNGLLEDPANPIVDPKKMQINLTGFLESKTGPFMSELWVLLLSAQDSPL
KVPAIFIEQKKAELRQREQADMEAQAAVKQRQELEAAKERKIADIRQRERGFPGSNNNTS
GRPRYQTEQGPARGGTRHSGNGNYNRNSSFVPPRDRDSGWASRAGGSRDNNTVNRHRTRS
RSPDRLYSPRRRERSPSPRREHSPRRDRLRYPRRQRSRSRSHSPIHSRYDRDVSSSHRRR
RTSYSRSPQRQRSPARSNRHQNSISPTLKRRASPARPPRSEKSAHSIHSKDSLSSAHRRK
HSGSSLEHDYHHTKHRSPPYEACGRDHNQRDRDRPQILHSPHSEGVGISIKGIASKRAVH
DHDELSKRLDVHPAEVVDANSDGDPPKASASS
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacgcagggttcttcaaaggtacttcgagcgagcaggatactcgcttcaaagac
aaagaaaagtcgctgctcaaatccatcaattttcctaaggaactcgataagaaggttgat
atgcgcaaagtcgagatgacggtgatgaggccatggattgcgcaaaaagtgatggacctt
cttggcttcgaggacgaagtcgtggtagaatatgtcaacggtcttttggaggatccagcg
aatccaattgtggaccctaaaaagatgcagatcaatctcaccggtttcctcgaatccaaa
acgggccctttcatgtctgagctttgggtccttttgttatctgcgcaagactcgcctctc
aaagtccccgccatattcattgaacagaagaaggcagaactacgtcaacgtgagcaggca
gacatggaggcccaagcagcggtaaagcaacgacaagagcttgaagctgcaaaggaacgt
aagatagcggacatcaggcaaagggagagagggtttcctggctccaacaacaatacctca
ggtcgacctcgatatcaaactgaacaaggaccagcgcgtggagggacgagacactccggt
aacggaaactacaatcgcaattcgagctttgtaccaccgcgtgatcgtgattcaggttgg
gcaagccgtgcaggtggtagtcgagataacaatacagtcaacaggcaccggactaggtct
cgttcgcctgatcgcttgtactcccctcgccgtagagaacgctctccatcacctcgccga
gagcactcaccccgtcgagacagattgcgctatcctcgccgtcagcgctcccgatcaaga
tcccattcaccaatccatagtcgatatgatcgagatgtttcctcatctcatcgccgacgg
cgcacttcttactcccgctcgccacagcgacagagatcacctgctagatcgaatcgccac
cagaattcaatatccccaacactcaagcgtcgcgcgtccccagcgcgacctccaagaagc
gagaagtctgctcattctatacactcgaaagatagtctttcttcagctcatcgtcggaag
cactctggttcttcattagaacatgattatcatcacactaagcataggagtccgccgtat
gaagcctgcggacgtgatcataaccaaagggaccgtgatcgaccccagatactccactca
ccccactctgaaggggtgggaatctcaatcaaaggcatagcttcgaaacgcgccgttcac
gaccacgatgaactttcaaagcgcttagatgtacaccccgctgaagttgtcgatgccaat
agcgatggcgacccacctaaagctagtgcttcttcttga
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