Melampsora larici-populina: MELLADRAFT_86177
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Entry
MELLADRAFT_86177 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
mlr
Melampsora larici-populina
Pathway
mlr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
MELLADRAFT_86177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mlr03009
]
MELLADRAFT_86177
Ribosome biogenesis [BR:
mlr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
MELLADRAFT_86177
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nrap_D4
Nrap
Nrap_D5
Nrap_D3
Nrap_D6
Nrap_D2
PAP_central
Motif
Other DBs
NCBI-GeneID:
18934106
NCBI-ProteinID:
XP_007409936
JGI:
Mellp1_86177
UniProt:
F4RKU3
LinkDB
All DBs
Position
Unknown
AA seq
1101 aa
AA seq
DB search
MAIETKHKKTSTAAKDPLTDGSPSIPNQDTGSQNQDVSDPKAPTKAATKPTYTETDLDDM
IAACSPASGVTFPLQVSSLLESTSLPHNKSLELVDLLGTLRSHLLSIPTIEKTSLEDSRK
RLQTLGIGLPFEDPKETVQWSFTFKAPQDIKVVGSWIMQTGVKLAKGKGRFNCIDLMVEM
PGDILQEKDYLSNRYFHKRAHYLAYLAVSLSSSSFAGHFDMSYVNLHNDASKPILLLKPN
GAMPSANFRPSIRLIPSYPSTVFSPARLSPTRANLKPPQKPTPRYNQSVLLDSTSIHFAH
LSYFSELGTNHSAFCKNMSIDETSLPDPPLIFGYERFGWLISFLVAHVLVGEDENGKKRA
QPMSSVGSDATVLFRQVIEWIAKWKSNSLVRMRPIDGSSAFVDEGEFAGTGDVLIDPTGQ
INLLANIPSGALQLLSPRDTKRICQDLEGKHTNEALFAISEIINKACGDRLSGFGFLIND
LQHTRSIEGGSNASTTADNVTLKLGVILNPAQAFNVITHGHSPDTSPIEAAAFREFWGDK
CDLRRFQDGTIEECVSWEVSDPLERLKIVQQIIRWVLSKKLGFADQKEQVISDFIGTFDN
LIVEHPHYVEKIYEKDPKCLGFTNVIKAFNEFVKDLKELNKDDFLPLSITSVQPTSEHLR
YSSVFIPGPRKMKGYRYQADASKYIPGMTCQVKFESSGKWPEDLEAIQKIKAALLAKISE
GMIRNKHVIKSEIVFDPDALPISDNVALEVLHSTGYAFVLSICYEREEMLQAKAVADSKS
AGEGESPMALEALATFRKKFIKLRKHHDAIAALQTRFPSFSYTVRIIKRWIASHLLSSQI
STEMVELLASAVYLILEKDQLPPATGSTGFLRFLKLIKEWKWREKPLLIPLQSSIEEDLD
GTDWLWTNTKPHLNTVNQIRPHRIVADRIQTLASASLSAIESNLNQPTSNFDVQTIFKSP
AEDYDFHLVLNVAAMTRIQQSLQLQVYENVDPLGLAIEIGDDPISEFVKELQRLHGDTIM
FFYDTLGGTSIAGIFNPLLLVPKTMKTHNHDYLTKPVSDQPAKTSASSKALVVMDTDATL
ASIKMIGTGIIHHILQKGVDY
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atggccattgagaccaagcacaaaaagacttccacagcggccaaggaccctctcacggac
ggaagtccttctataccaaaccaagatactggatcgcaaaatcaagatgtctcagatccc
aaagctcctacaaaggcagccacgaaacccacttatactgaaacagacttggatgacatg
atagcggcatgcagtccagcttctggggtcacatttcctctacaggtatcttcgctttta
gaatctaccagtcttcctcacaataaaagtctagaactcgtcgatctcctcggtactcta
agatcgcatttactttctattccaacaatagaaaaaacttcacttgaggattcaagaaaa
agattacaaacattaggtatcggtttaccttttgaagatccaaaggaaactgtacaatgg
agttttactttcaaagcgcctcaagatatcaaagtcgttggtagttggatcatgcaaact
ggtgtcaagcttgccaaaggtaaggggcggttcaattgtatagatttgatggttgaaatg
cccggtgatatattgcaagaaaaggactacttatcgaaccgatactttcataaacgggct
cattatctagcgtacttggccgtctccttgtcatcatcatcatttgcaggccacttcgat
atgtcatatgtcaatctacataatgacgcatccaagccaattttgttactcaagccaaat
ggagctatgccatccgcaaactttagaccttcgatcagattgatcccatcataccccagc
acagtcttttcacccgcgagactatctcctacacgagcaaatctcaaacctccacagaaa
cctacaccacgctacaatcaatccgtgctacttgacagcacatctattcactttgctcat
ctttcatattttagtgaacttggcacaaatcattcagcgttttgtaaaaacatgtcgatt
gatgaaacttcgttacccgatcctcctttgattttcgggtatgaaagatttggttggctg
attagtttcttggtagctcatgttttggttggagaagatgaaaatggaaaaaagcgagct
caacctatgtcttctgttggatctgatgcgacagtcttgtttcgacaagtgattgaatgg
atagccaaatggaaatcgaattcattagtcagaatgaggccgatcgatggatctagtgcg
tttgtagatgagggtgaatttgctggcaccggtgacgttctcattgatcctactggacag
atcaaccttttggcaaatataccgtcaggcgctcttcagctgctttcacctcgggatacg
aaacgaatttgtcaagatttagaaggaaaacatacaaatgaggcactttttgcaatttct
gaaataatcaacaaggcctgtggagatcgcttgtctggattcggctttttaatcaatgat
ttacaacatacgagatcaatagagggtgggtccaacgcgtctactacagcggataatgta
actttgaagctcggtgtgattttaaatcctgctcaggctttcaatgtcattacccacggc
cattctccggatacatcaccgatagaagccgcggcttttcgagaattctggggtgataaa
tgtgatttgagacgatttcaagatggtacgatcgaagaatgtgttagttgggaagtatct
gatccactagaacgactcaagattgtacagcaaatcattcgttgggttttgagcaagaaa
ttaggatttgccgatcaaaaggaacaagtcatatcggattttattggtacattcgataat
ttgattgtagagcatcctcattacgtagagaagatatacgaaaaggaccctaaatgctta
ggattcaccaatgtcatcaaagcttttaacgagtttgtaaaagatttgaaggagttgaac
aaggacgatttcttaccactttcaatcacttcagtacagccaacttcagagcatcttcga
tactcatccgtcttcatacctggcccacgaaaaatgaaaggatatagatatcaagctgat
gcttcaaagtatataccaggaatgacatgccaagtaaaattcgaaagttcaggtaaatgg
ccggaagatttagaagctattcaaaaaatcaaagcggcactattggctaagatctcggaa
ggaatgattcgaaataaacatgtgatcaagtctgagattgtctttgaccctgatgcatta
ccaattagtgataatgtagcattagaagtcttacattcaacgggatacgcatttgtactt
tcgatatgttacgaacgagaagaaatgttacaagccaaagctgtggctgatagtaaatca
gcaggtgaaggtgaatcacctatggctctagaagcattagcgacttttcgaaagaaattt
atcaagttacgaaaacatcacgatgctattgctgcacttcagacacgatttccatcattt
tcttatacggttcggattataaaaagatggattgcatcacatttactttcaagtcagatc
tctactgagatggttgaattattagcatctgctgtatatttaattttagaaaaggatcaa
ttaccacctgctactggttctactggatttctaagatttttgaaattgattaaagaatgg
aaatggagagagaaaccacttttgatacctcttcaaagttcaatagaagaagacttggat
ggtactgattggctttggaccaataccaaacctcatcttaatactgtgaatcaaatccga
cctcaccgaattgttgctgatcgaattcaaactttagcttcagcttctttatctgctatt
gaatctaatctgaatcaaccaacctcaaattttgatgtacaaacaatctttaaaagtcca
gctgaagattatgactttcatttagttttgaatgtagctgctatgactcggatacaacag
tctttacaacttcaggtttatgagaatgtagacccacttggtcttgctattgagattgga
gatgatcctatttcagagtttgtcaaggaactacagcgactgcacggtgataccatcatg
ttcttttatgacacccttggtggtacatctatagctggaattttcaatccacttctacta
gtaccgaaaacaatgaagacgcataatcatgactaccttacaaagccagtatcagatcaa
cctgcgaagactagcgcgtcatctaaagcattggtggtgatggatactgatgctacattg
gctagtatcaagatgattggaactggtattatacatcatatcttacaaaaaggagtcgat
tattag
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