Melampsora larici-populina: MELLADRAFT_87299
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Entry
MELLADRAFT_87299 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mlr
Melampsora larici-populina
Pathway
mlr03420
Nucleotide excision repair
mlr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MELLADRAFT_87299
03430 Mismatch repair
MELLADRAFT_87299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mlr03400
]
MELLADRAFT_87299
Enzymes [BR:
mlr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MELLADRAFT_87299
DNA repair and recombination proteins [BR:
mlr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MELLADRAFT_87299
MMR (mismatch excision repair)
Other MMR factors
MELLADRAFT_87299
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
Motif
Other DBs
NCBI-GeneID:
18934460
NCBI-ProteinID:
XP_007410392
JGI:
Mellp1_87299
UniProt:
F4RMR3
LinkDB
All DBs
Position
Unknown
AA seq
1091 aa
AA seq
DB search
MVRRGHAGLCRVIRSFFYEAPHDLESRLKFFIASDSRVCSKWKPADPCRPGQWYFLCNFY
TTCKTAKLIPVGSSGKTRVLTCRVAYLIKNTGIDPKDLAVVTFTNKAANEMKNRLYVLLG
AKLANEIVMGTFHGVCVRFLRQHGSKVGLKANWVICDRKQQLAYCKHVLKDPKVKARMAG
SVLLKFTDESLLDYVSKRKSKGEAFEACQKTKKDPFTNELFDAYNSALRDDNCLDFDDLL
TYGFVRHHMYTRLHLPAHIVASFACISERLFRCHPQVISYIRHVLIDEFQDTNVVQYQMM
KHMAYRGAVTIVGDPDQGIYGWRSAEVGNLMRMREELPLKLAHPKCISFCCAARYYSLHQ
KVKHGSDFDECLSSLYTDTQRIDKSLFTSHPKVSLPVLQAFRKPPDESEFIVREIQRLIA
HTGGQLNFNDFSILIRYGALSRNVEAALQAAHIPTRMVGGVKFFERTEVKDIIAYLQLAD
NPMFVPAFDRIANVPARAIGAVTIKAIKEAAKASESNPMEIMRRVVRGDSFPGLSQTHRS
KFKKFLCVIGKIQSMARSGSSIVEIIDTLIAQVNYVAHLQAPSLSDADERLQNVEELKSF
ALHLEGGSSPSSSQPTQSGEDTDTLDWKVLGNDDEALADLEIEPLNSDEEPTGLRRFLTE
SMLSTDTEAEEGKANKNAPKVTISTCHASKGLEWPVVFVPAVENGIFPFYRCKDEESEKE
ERRLLFVAMTRAQGLLYLSHCGQRMAGAETRNQSISPFVSSLTTQTTTTKSKSSNNAVFT
SKRPMLDETVRQELSDVLSRPMPSKQDVTTAIEKYQRIAGVEAQTSNLQGSDNSQSNYAF
QDPSYNRWGSSSTSFNAVGHNGVGSQAPSSSAGRFSSSQPTPTIKPYGFNRPGSQVPPVA
AGKFVSTQPSSAMPGFSSAAVYTSHESQAGATSNNTKQFVPVLKAYGFNRPGSQAPPAPK
SGTLGVLSATTAGSKNISAPFIPQIPRKPLAPLTEAVQNLPETRLSRGAQVILDLTGDSS
SDTAVGSTKVSLAGFQASSSSFMVGLKHTLPQDSNSAVVNKKQKKPPVKKVAGGSTSQKK
PTKKGKGKSKA
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgccgaggtcatgcggggctttgtagggtcattcggagctttttctacgaagcc
ccgcatgacctcgagtcaagattaaagttttttatagcatcagacagtcgagtctgtagc
aaatggaagcctgcagatccttgcaggcccgggcagtggtacttcctctgcaacttttat
acaacttgcaagacagcaaaactaataccagtcggctcttcaggaaaaactcgtgttctc
acctgtcgcgtagcctatctcatcaaaaacactgggattgatccaaaggatcttgcagta
gtgacattcactaacaaagccgccaatgagatgaagaatcggctatacgtccttcttggt
gcaaagctagccaatgagatagtcatgggcactttccacggtgtttgcgtcagatttttg
cgccaacacggctccaaagttggcttgaaggcgaattgggtgatttgcgatcgcaaacag
cagcttgcgtattgcaagcatgtgctgaaggatccaaaggtcaaagctcgaatggctgga
tcggtcctgcttaagttcaccgatgaatcattgttggactatgtctccaagagaaaatcg
aaaggcgaagcctttgaggcatgccaaaagaccaaaaaagatccattcacgaatgaactc
ttcgacgcctataattctgccctaagagacgataattgcttagacttcgatgatctactc
acttacgggttcgttcgacatcatatgtacacaaggcttcatctaccagctcatatagtt
gcatcttttgcctgtatcagcgaacgactgtttcggtgccatcctcaagtcatatcttac
atcagacatgtattgattgacgagtttcaagatacaaacgtggtacagtatcagatgatg
aaacatatggcatatcgtggtgctgtcaccattgtcggtgaccctgatcaaggtatatat
ggttggcgtagtgccgaagtcggaaacttgatgagaatgagggaagaactaccgctcaag
ctcgctcatcctaaatgcatctctttctgttgtgcagcaaggtattattctctgcatcag
aaagtgaagcatggatcagattttgatgaatgcctctcctctttatacacagatactcag
aggattgacaagagtctgttcacttctcatccaaaggtttcacttccagtcctgcaagcg
tttcgtaaaccgccagatgaatccgaattcattgtccgcgaaattcagcgccttattgct
catactggcggccaactgaactttaatgacttcagtatcctcattaggtatggtgctctc
agtcgaaatgttgaagctgcactccaagctgctcatattccaacacgcatggtcgggggg
gttaagttctttgagcgaactgaggttaaagacattattgcatatttgcaacttgccgac
aatcccatgtttgtaccagcgtttgacagaattgccaatgttcccgctcgtgccattggc
gcagtaactattaaagccataaaagaagcagctaaagcttcggaatcaaacccaatggag
atcatgagacgagtagtcagaggtgactctttccctggcttaagtcaaacgcacagatcc
aaattcaagaaattcttgtgtgtgattggcaagattcagagtatggccaggtcgggctct
tcgattgtcgagattattgacacgctgatagcacaagttaactacgtggcacatctgcaa
gcccctagcttgtcagatgcagatgagcgactccagaatgtcgaagagttgaagtcgttt
gctctccatttggaaggtggaagctcaccgtctagctcgcagcccacgcagtctggggaa
gacaccgatactcttgattggaaggttctcggaaacgatgatgaagcattggctgatctt
gagatagaaccgctcaattcggacgaagagcctacgggtttacgcagatttttgacagag
tctatgctgtctaccgacactgaagccgaagaaggaaaagcaaacaaaaacgcgccaaaa
gtcaccatttcaacgtgccatgcctcgaagggtttagaatggccggttgtatttgtccct
gctgtggaaaatggtatattccctttttatcggtgcaaagatgaagaatctgaaaaggag
gaacggcgactattgtttgttgccatgactcgggcgcaaggtcttttgtacttgagtcat
tgtggtcaacgtatggccggagcggaaacccgaaatcaaagtatctctccttttgtttcg
tcactgacaacccaaactacaactacaaaatcaaaatcgtcaaataatgcagtgtttact
tcgaagcgtcctatgttggatgagactgtgcggcaggaactttcggatgttcttagtcga
ccaatgccttcgaagcaggatgttactactgcaatcgaaaagtaccagcgtatcgcagga
gttgaagctcaaacttcaaatctccagggctcggacaacagccaatcgaattatgccttc
caagacccaagttataatcgctggggctccagttcgacgagcttcaatgcggtcggtcac
aatggcgtaggctcacaagccccgtcaagctcggctggaagattttcgtcctctcagcct
actcctactataaaaccatacggcttcaaccgaccaggatcgcaagtgccaccggtcgca
gctggcaaatttgtctccacacaacctagctcggctatgccgggattttcatccgcagcg
gtttatacatcacatgaatcgcaggctggagctacttccaataacaccaaacaatttgtt
cctgttctgaaagcatatggcttcaacaggccaggttcacaggctcctccagcgccaaaa
agtggtactttgggggttttatccgccactaccgctggtagcaaaaatatctcggcacct
ttcattccacagatcccccgcaaaccacttgcgccattaactgaagcggttcaaaattta
cctgaaactcgattgagccgcggggcccaggttattctcgacttgactggtgatagctca
agtgatacggcagtaggtagcaccaaagtctcactggctggctttcaagcttcctcctcg
agcttcatggtcggtctcaaacataccctcccacaagattcgaactcggctgtcgtaaac
aaaaagcagaagaagccgcctgtgaagaaagttgccggggggtcaacgagtcaaaagaag
ccaaccaagaaagggaaagggaagtcaaaagcataa
DBGET
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