Melampsora larici-populina: MELLADRAFT_87820
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Entry
MELLADRAFT_87820 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
mlr
Melampsora larici-populina
Pathway
mlr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MELLADRAFT_87820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mlr03400
]
MELLADRAFT_87820
DNA repair and recombination proteins [BR:
mlr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
MELLADRAFT_87820
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
Motif
Other DBs
NCBI-GeneID:
18934650
NCBI-ProteinID:
XP_007411043
JGI:
Mellp1_87820
UniProt:
F4RPL2
LinkDB
All DBs
Position
Unknown
AA seq
593 aa
AA seq
DB search
MIVCPVTLVKNWAREMNKWLGRSRLNMFVADGKSNIKHFTSSPYYNIIIIGYERLRTLSQ
EINAVYPPIGLIIADEGHRLKSIEAKTTQALRTLKTHRRVVLSGTPIQNNLNEYYAMVDF
VNPGILSDFQTFKKKFEQPIAKSREPGSTPSQKALGRSRADELAELSDSYVLRRGSDVIA
HHLPPRHDYCLFIDLAAAQKKIYAATLASPEIRAVFSGESSQQLVLINTLKKLCNSAGLL
INETSIQNLAKNASTLFPAWVTRNDIKLSGKMIALASFLKILHAKTDEKIILVSNFTSTL
DVIEAHCRSQNYSLCRLDGKTPQTKRDDIVQTFNRMTARSQFVFLLSSKSGGVGLNLIGA
SRLILFDSDWNPATDLQAMARIWRQGQKKACHIYRFLATGTIDECIFQRQVTKTGLATDL
IKDAGVSREVLDRGNTFTSDELKRLFELHTGTPCHTHDLLGCRCFETKASDEVAEDAVGQ
ESDTDSLPEASQLFQLATQYKPSNVQKEPKKLAELETWDHINTSLSDSLEELNDSILYDT
IVDLKSQLLESDDEEDSHEHVATTKGGEITFVFHKTNTILGSTENSDVEVQGV
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgatagtgtgtccggtgactcttgtcaagaactgggccagagagatgaacaaatggctt
ggtcgtagtcggctcaatatgtttgttgccgatggtaaaagtaacatcaagcacttcact
tcaagcccttattacaacatcatcatcatcggctacgaaaggttgagaacattgagtcag
gagatcaatgctgtatatcccccgataggtttgatcattgctgacgaaggccatcgactc
aaatcgattgaagccaaaactacacaagccttacgaacattgaaaacccatcgccgggtt
gttttgtctggtacacctatccaaaataatttgaatgaatattacgcaatggtcgatttt
gtcaaccctggtatcctttctgattttcaaacgttcaagaaaaagtttgagcagcctatt
gcgaagagtcgcgagcccggttcaaccccatcccaaaaagcattgggccgatcaagggct
gacgaattggctgaattgagcgatagttatgtcttgcggaggggttccgatgtgattgct
caccaccttccgcctcgacatgattattgcttgttcatagacttggcggccgctcaaaag
aaaatttatgcggccacattggcatctccggaaatccgggcagttttctctggagagagt
agtcagcagcttgtgttgatcaacacgctgaagaagctttgcaattctgccgggttactc
ataaatgagacttcaattcaaaacttggcgaaaaatgcttctaccttgtttccggcatgg
gtcacacgcaatgacatcaaactatcagggaaaatgatcgccttggcaagctttctcaaa
attctacacgcaaagaccgatgagaaaattatcttagtttcgaatttcacgtcgaccctc
gatgtgattgaagcacactgtcgatcgcaaaattattctctttgtcggttggatggaaag
acaccccaaaccaagagggacgacattgtacagactttcaatcgtatgacggcacggtct
caatttgtctttttgttgagcagcaaatctggaggggtaggactgaatttgatcggggca
tcacgcttaatactttttgatagcgattggaaccccgcaaccgatttgcaggcaatggct
cggatttggagacaagggcagaagaaggcttgtcatatctatcgtttccttgcaactggt
accattgatgagtgtatcttccagcgacaagttacaaaaactggtctcgctacagatcta
attaaagatgccggtgtgagccgcgaagttcttgatcgggggaataccttcacttcggac
gaattgaagcgattatttgaacttcacactggaactccttgccatacgcacgacttattg
ggatgtagatgcttcgagaccaaagcaagcgacgaagtagccgaagacgctgtcggtcaa
gaaagtgatacagattcccttcctgaggcctcacaattgtttcagcttgccacgcaatac
aagccatcaaatgttcaaaaagaacccaaaaaactggccgagttggagacgtgggatcat
attaatacctccttgagtgattcacttgaggaactaaatgatagcatattgtatgacacc
atagtggatctcaaatcccaactgctcgagtcagatgatgaggaagattcacatgaacat
gtcgcgaccacgaagggtggggagattacatttgttttccataaaactaatacgatctta
ggtagtacagagaattcagatgtcgaagtacagggtgtatag
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