Melampsora larici-populina: MELLADRAFT_88164
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Entry
MELLADRAFT_88164 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K12881
THO complex subunit 4
Organism
mlr
Melampsora larici-populina
Pathway
mlr03013
Nucleocytoplasmic transport
mlr03015
mRNA surveillance pathway
mlr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MELLADRAFT_88164
09122 Translation
03013 Nucleocytoplasmic transport
MELLADRAFT_88164
03015 mRNA surveillance pathway
MELLADRAFT_88164
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlr03019
]
MELLADRAFT_88164
03041 Spliceosome [BR:
mlr03041
]
MELLADRAFT_88164
Messenger RNA biogenesis [BR:
mlr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
MELLADRAFT_88164
TREX complex
MELLADRAFT_88164
Spliceosome [BR:
mlr03041
]
Complex C
Other components
EJC/TREX
MELLADRAFT_88164
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
MELLADRAFT_88164
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Btz
Motif
Other DBs
NCBI-GeneID:
18934789
NCBI-ProteinID:
XP_007411632
JGI:
Mellp1_88164
UniProt:
F4RQT7
LinkDB
All DBs
Position
Unknown
AA seq
160 aa
AA seq
DB search
MASLLNRSLGEIKKSREVGSHPNQKPIFGKNRINETSDSWKHDLFDAQPIKESIVIDEAR
SPALLITNLHYDVSEAELEALFGQIGKIDRGPVIKFSNFSNLNESLHFSWSFDIHSSFTA
YTSHPFDLHFLYDSEVSSNLSRGMKSVSHSTNRIVLGRIS
NT seq
483 nt
NT seq
+upstream
nt +downstream
nt
atggcttcactcttaaatcgtagtttgggcgaaattaaaaaatcaagagaagttggttca
catccaaaccaaaaaccaatctttggcaagaatagaatcaacgaaactagcgatagttgg
aagcatgacctttttgatgctcaacctatcaaggaatcaattgtgatcgatgaagctaga
tctcctgcacttttaatcactaaccttcattatgatgttagcgaagcagagctagaggct
ctcttcggacaaattggtaaaatcgatcgaggaccagtaatcaaattctctaatttctcg
aatctcaatgagtcgcttcacttctcttggtcttttgatatccattcttcttttacggca
tacacctcgcaccccttcgatctacatttcttatacgattctgaagtctcctcgaatctt
tcaagagggatgaaaagtgtatctcattcaacgaatcgaattgtgttaggtcgcatatct
tga
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