KEGG   Melampsora larici-populina: MELLADRAFT_88164
Entry
MELLADRAFT_88164  CDS       T03138                                 
Name
(RefSeq) hypothetical protein
  KO
K12881  THO complex subunit 4
Organism
mlr  Melampsora larici-populina
Pathway
mlr03013  Nucleocytoplasmic transport
mlr03015  mRNA surveillance pathway
mlr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mlr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MELLADRAFT_88164
  09122 Translation
   03013 Nucleocytoplasmic transport
    MELLADRAFT_88164
   03015 mRNA surveillance pathway
    MELLADRAFT_88164
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mlr03019]
    MELLADRAFT_88164
   03041 Spliceosome [BR:mlr03041]
    MELLADRAFT_88164
Messenger RNA biogenesis [BR:mlr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     MELLADRAFT_88164
    TREX complex
     MELLADRAFT_88164
Spliceosome [BR:mlr03041]
 Complex C
  Other components
   EJC/TREX
    MELLADRAFT_88164
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    MELLADRAFT_88164
SSDB
Motif
Pfam: RRM_1 Btz
Other DBs
NCBI-GeneID: 18934789
NCBI-ProteinID: XP_007411632
JGI: Mellp1_88164
UniProt: F4RQT7
LinkDB
Position
Unknown
AA seq 160 aa
MASLLNRSLGEIKKSREVGSHPNQKPIFGKNRINETSDSWKHDLFDAQPIKESIVIDEAR
SPALLITNLHYDVSEAELEALFGQIGKIDRGPVIKFSNFSNLNESLHFSWSFDIHSSFTA
YTSHPFDLHFLYDSEVSSNLSRGMKSVSHSTNRIVLGRIS
NT seq 483 nt   +upstreamnt  +downstreamnt
atggcttcactcttaaatcgtagtttgggcgaaattaaaaaatcaagagaagttggttca
catccaaaccaaaaaccaatctttggcaagaatagaatcaacgaaactagcgatagttgg
aagcatgacctttttgatgctcaacctatcaaggaatcaattgtgatcgatgaagctaga
tctcctgcacttttaatcactaaccttcattatgatgttagcgaagcagagctagaggct
ctcttcggacaaattggtaaaatcgatcgaggaccagtaatcaaattctctaatttctcg
aatctcaatgagtcgcttcacttctcttggtcttttgatatccattcttcttttacggca
tacacctcgcaccccttcgatctacatttcttatacgattctgaagtctcctcgaatctt
tcaagagggatgaaaagtgtatctcattcaacgaatcgaattgtgttaggtcgcatatct
tga

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