Melampsora larici-populina: MELLADRAFT_88697
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Entry
MELLADRAFT_88697 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
mlr
Melampsora larici-populina
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mlr03009
]
MELLADRAFT_88697
Enzymes [BR:
mlr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MELLADRAFT_88697
Ribosome biogenesis [BR:
mlr03009
]
Eukaryotic type
90S particles
Helicases
MELLADRAFT_88697
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
18934961
NCBI-ProteinID:
XP_007412068
JGI:
Mellp1_88697
UniProt:
F4RSN6
LinkDB
All DBs
Position
Unknown
AA seq
680 aa
AA seq
DB search
MGLAGFLGKPALRTLSGVPRPGCSLGLGTRDFYTCARTYGKRISYTHQSNSFQKAFKGQR
VIISQANHETKAPQVQTNQKTSNGAYPSQLDIFSHSSSKKSEKASIVDQTENDEPHNDPI
ESEEISSDEVSLLRKQHKIRLTPTVIEDPSIPDLITSFDQLTRFTKNSSKSRKPRVQITS
DTVKNLVRNMSTRGWNQPTPIQMQAIPIILAVFEDLLAHSPTGSGKTISFLLPILLSLPP
SNQSQRTPRALIIEPTRELAQQVCEVTKGLMGVNDKSQEANWIVSVLGEDEPGAEDPAAK
VQKPHNKRQRKASNGTSDRKPSQANVISRLPSTGCDVLISTPLKLLYHIRDSPESLSHIT
HLVLDEVDQLLDKSSFLEQVDQILEILKQATTTNQETKVVQKVMMSATISSEVEELSKSV
MSSARFVRLLIGQKHAAPNKVKQRLDYVDSEASKLSHFVTLLRNNNNTLSKVEKLCPPVL
IFCQSAERVEELSKILRRELIGTVKSNCIDYIHGSRPKEDRDQIVLEFANKSIWFLCCTD
IFSRGIDFKEVNTVICWDFPQSSDSYLHRIGRTGRAGNTGQAVTFFTKQDGKYLKMVVNV
MKNSGCEVPDWMLKLGNLSKNDRKIMKIKPVKRTSVKQAALGINNASRKRKKDGEEEKGK
ADGDNEDDEEEWVPCSVDVE
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgggtctggcaggatttctcggtaaacccgcacttcggactctgtcaggagtaccgcgg
ccaggctgttcactcggacttggtacccgggacttttacacatgtgccaggacatatgga
aaacgcatttcatacactcaccaaagcaattcatttcaaaaggccttcaaaggtcagcga
gtgatcatcagccaggctaatcatgagactaaagctcctcaagttcaaacaaatcaaaaa
acatctaatggtgcatacccttcacagcttgatatcttctcacattcaagctctaaaaaa
tcagagaaggcatcaatcgtcgatcaaacagagaacgatgaacctcacaacgatccaatt
gaatccgaagaaatatcatcagatgaagtgtctttactgcggaaacagcataagattaga
ctcactccaacagtcattgaagatccttcgattcctgatttaatcacttcatttgatcaa
ttaactcgattcaccaagaattcttcaaaatccagaaaacctcgagtacaaatcacatca
gacactgtaaagaatttggttcgaaatatgtcaactcgtggttggaatcaacctactccg
attcagatgcaagccatccccatcattctagcagtctttgaagatttgttggctcactcg
cctacaggatctggcaagacgatttcattcttacttccaatcttattatctttaccacca
tccaaccaatcccaacgaactccacgagcattgataatcgaacctacgcgagagttggct
caacaggtctgtgaagtgacaaaaggcttgatgggcgtcaatgataaatctcaagaggca
aactggatcgtatctgtcttgggcgaagacgagcccggtgctgaagatccggctgccaag
gtccaaaagcctcataacaaacgtcaacgcaaagcttcaaacggtacttcggaccgtaaa
ccttctcaggcgaatgtgatttctcggttaccttcaacaggatgtgatgtattgattagc
acaccactcaagctattatatcacatacgagactcgcctgaatcattatcacatataact
catctcgtcctggatgaagtagatcaactattagataagagtagttttcttgaacaagtc
gatcaaatcctagaaatcttaaaacaggctactacaaccaatcaggaaactaaagtggta
caaaaagtgatgatgagtgcgactatctcaagtgaagttgaagagttgagtaaatcagtc
atgagctcagctcgttttgtaagattactcattggtcaaaaacatgcagcaccaaataaa
gtgaaacaaagattagattatgtagattcagaagccagtaaattatcacattttgtcact
ttgttacgaaacaataataatacattaagtaaagtcgaaaaactatgtccaccagtcttg
attttttgtcaatcagccgaaagagtagaagaactttccaaaatcttaagaagagaatta
attggaaccgttaaatcgaattgtattgattatattcatggttcaagacctaaagaagat
cgagatcaaattgtcttggaattcgcgaataaatcaatttggtttttgtgttgtactgat
atttttagtcgtggtatagattttaaagaggtcaatacggtgatttgttgggattttcct
caaagttctgattcttatttgcatcggataggtcgtacaggaagggctggaaacacagga
caagccgttacattttttacaaaacaagatggaaaatatctaaagatggtagtcaatgtg
atgaaaaatagtggatgtgaggtaccagattggatgttaaagttaggtaacttgagtaaa
aatgatcgaaagattatgaagattaaacctgtgaaacgaacaagtgttaaacaagctgct
ttaggtatcaataatgctagtcgaaagagaaagaaagacggggaagaggaaaaggggaag
gcagatggagataatgaggatgatgaagaggaatgggtaccttgctctgttgatgttgaa
tga
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