Melampsora larici-populina: MELLADRAFT_90044
Help
Entry
MELLADRAFT_90044 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
mlr
Melampsora larici-populina
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mlr01009
]
MELLADRAFT_90044
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlr03019
]
MELLADRAFT_90044
04131 Membrane trafficking [BR:
mlr04131
]
MELLADRAFT_90044
03036 Chromosome and associated proteins [BR:
mlr03036
]
MELLADRAFT_90044
Enzymes [BR:
mlr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
MELLADRAFT_90044
Protein phosphatases and associated proteins [BR:
mlr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
MELLADRAFT_90044
Messenger RNA biogenesis [BR:
mlr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
MELLADRAFT_90044
Membrane trafficking [BR:
mlr04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
MELLADRAFT_90044
Chromosome and associated proteins [BR:
mlr03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
MELLADRAFT_90044
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Arb2-like
Motif
Other DBs
NCBI-GeneID:
18935417
NCBI-ProteinID:
XP_007413107
JGI:
Mellp1_90044
UniProt:
F4RVI7
LinkDB
All DBs
Position
Unknown
AA seq
670 aa
AA seq
DB search
MPSSQLVRSHSSTLNGPSSSKTGLNQPPSTASQSSHQVIRSSLSSIPTGICSSEQMLKHW
KPDCHFDHEDDDDDDDDEPERPSRITRIMAQVTKAKLIPHLLHVQVRKATKEEIMLVHSE
GHWNRIQDTASMDIQELKDRATYYSRLSLFVNAETFDCARLSCGGVIEMCRAVVEGRIRN
GFAVVRPPGHHSEPEDPSGFCVFNNAAVTAKWLRTIYPDKIRRILLIDWDVHHGNGTQRS
FYHDPSVLYISIHRYLENGRTTYFYPGSDWGGSTRIGEGLGRGYNVNIPWPEAGMGDEDY
IFAFQRLVMPIAMEFNPDFVIVSAGFDAAKNDPLGECNVTPAGFALMTHMLSSLANGNIV
LALEGGYHLESLALSATECIKVLMGETPPKLEKALVASDVATETVDECLRVQAEFWKSLP
RGLLTQDELTMERLNIPISDVLGMHRSYDLHHTHNLCAIPLHDTTSTALTNNYTNKIMVS
SNVYETETVVLFMHDLGNVRNELHVQPTNFNDEKAAMLEGNTRIMKWLHQHEYGIIDVQV
SPPTSDLTTDGLAKKVERKKAVKELVNWLWSQFLTLADCENLVLICLGEGCKSLPPLLSI
KGIQEKLKASVYVPTLNRIPPPKLSPDLDWYQHLSITFYPQGPLKDHGLPIPTDISSHGL
KLSTGNSYET
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgccatcatctcaacttgttcgatcccatagttctaccctcaatggaccaagctcttcc
aagactggcttgaatcaacctccatcaactgcttctcaatcgtcacaccaggttatccgt
tccagcctttccagcattcccactggaatatgtagctctgaacagatgttgaagcattgg
aagcctgattgtcatttcgatcacgaggacgacgacgatgatgatgatgacgaacccgag
cgaccatcgaggatcacgagaatcatggctcaagttactaaggcaaagttgataccacat
ctactgcatgttcaagtgcgaaaggccacgaaagaagaaatcatgttggttcatagtgag
ggtcattggaatcgtattcaagatactgcatctatggatatccaggagctcaaggatcgc
gccacatattattcacgtttatctctctttgtcaacgctgaaacgttcgattgcgctcgg
ctgtcttgtgggggagtcattgagatgtgtagggcagtggttgagggtcggattcggaat
ggcttcgcggtcgtccgaccacctggtcatcattctgaaccggaggatccatcgggtttt
tgtgtgttcaacaatgctgctgtgactgcaaaatggcttcgaactatctatcctgataag
attcggcggatcctgttgattgattgggatgttcatcatgggaatggaacccagcgatca
ttttatcatgatcccagcgttctgtacatctccatacaccgttatctagagaacggacga
accacatacttttatcctggctcggattggggtggaagtacccgaataggcgaaggactt
ggcagaggctataacgtcaatattccttggcctgaagccgggatgggagacgaggattac
atcttcgcattccagcgcctcgtgatgcccatcgccatggaatttaaccccgattttgtc
attgtttctgctggattcgacgcggccaagaatgatccgttgggtgaatgcaatgtcaca
ccggcaggctttgctctgatgacccatatgttatcttctttggcaaatggcaatattgtt
ttggctcttgagggaggttatcacctcgagtcattggcattgtcagcaacagaatgtatc
aaggtcctgatgggggaaacaccgcccaaattagagaaagccctggttgctagtgatgta
gccacagagactgtggatgagtgcttgagagttcaggccgaattttggaaaagtctaccc
aggggattgttgacacaagacgagttaactatggaacgtctcaatatccctatcagtgat
gttctggggatgcatcgttcctatgatttgcatcatacccacaatctatgcgcgatccca
ttgcatgacacaacctctacagctttgacgaacaactatacgaataaaataatggtctcg
tcaaatgtatatgagactgaaactgttgtgctattcatgcacgatttagggaatgtccga
aatgagctacatgtacagcctactaacttcaatgatgaaaaggccgccatgcttgaagga
aacacccgtataatgaaatggcttcaccagcatgaatatggcatcatagatgtccaagtc
tcgcctcctacatcggatctcactacggatgggctagcaaagaaggtcgagcggaaaaag
gctgtcaaggagctcgtcaattggttatggagtcaattcctcacacttgcagactgtgag
aatttggtattaatttgtctaggtgaaggatgtaaatctttgccacctttgttatcgatc
aagggtatccaagagaagttgaaagcctcagtatatgtacctactttgaataggatcccg
ccgcccaagttatcacccgatctggattggtatcaacacctatccataacgttttatcct
caaggacccttgaaagatcacggtctccccataccaaccgacatatcatctcatggcctc
aaattatcaacaggcaattcatatgagacctag
DBGET
integrated database retrieval system
