Melampsora larici-populina: MELLADRAFT_90304
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Entry
MELLADRAFT_90304 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K14327
regulator of nonsense transcripts 2
Organism
mlr
Melampsora larici-populina
Pathway
mlr03013
Nucleocytoplasmic transport
mlr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
MELLADRAFT_90304
03015 mRNA surveillance pathway
MELLADRAFT_90304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlr03019
]
MELLADRAFT_90304
Messenger RNA biogenesis [BR:
mlr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
MELLADRAFT_90304
mRNA cycle factors
P-body specific factors
MELLADRAFT_90304
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
18935521
NCBI-ProteinID:
XP_007413460
JGI:
Mellp1_90304
UniProt:
F4RWG5
LinkDB
All DBs
Position
Unknown
AA seq
1127 aa
AA seq
DB search
MDTKKETTNSTKRAILRAINLSPPPTPTLQYLDSSLKKNTAYIKRLKTGLHLSDNVQVLI
KETQTISLDKYLSEISVAANDGLSKCKNASEIWGAVEVISALHRRFPITFTQPFLQHFTA
GLAVPNKQYLASLALDQRDREESARILRQRSLLRCLAEFDLVGLIHPSTAGKTISEGETT
FNTLKDLLTADKEALVIPLPLAVSFSKQFTTLYFPSTAPFATTPAEASEARKVEFDEDII
ANSVKEKFGKLFRQYFDALGRKAVKDHIKLRETEKRNTEAAIRSGQIFEDRIQAFEKLSK
DQEKLWTGIQSLSETLSLTPPTLPEASASSPTNAITGTGPSAFGGVSDLGIWADEEEKKF
YEELIDLRDEVPVMLLGLDAPEKKAETSDPVEAEKDEQAKLEEEMEKLAVKDLSLGSDDP
LDHPEDDEQEEINQNASAGPVPPLTGEALASGPAARLTALFTRLDDVYGAEAIDRITVEF
AYLNSKAARNRLIKHFLSVNKNRMDLLPYFARMTATLSKYMPDMLAGLLSGLKHQLEDEF
RYLQRKKSASQDFYALRSKNIRYISELTKFNLTPSHSILHCIKVCVDELTGPNIENLCNL
LEGCGRWVLRNERTRDKMTQLLEQMKRKKASQNMDSRQVMMLENAYYQAVECNPPDRPVI
EPKIRTPMELFMRYQLYDCLNKKSVDKVIKILRKLHWDTPEVPKILKSILTKVWKIKYGN
IYLFAIVVHDLSKYHSDFTVSIIDQVLENVRFGMELNLFKDNQQRIASIKYLGELYNYRV
VDSKVIFDTLWSFVTFGHPDGRPSPEMICPIDGPDDFFRVRLICTLLHTCGHCFDRGSLK
KRLNNFLTFFIMYLRCKETPPMDVDFLLQDTIEELQPKLNIYLGFEQAVKAVEEMYAATS
QGGATEEDKADDDEMGDEDETRDRAEPGDGGDDDLNDDANDGDTVVDGGEGPDGEEDLPR
NTVSNAISKEEEEEFARELAKMIAETGGGGTQTGAGGANEAARKNERNPTSSSLFSDQGL
PVLKNIFKPGGSGALALAEGDRENEGDKMTFALLTKKGNKQQLKPMQIPSTAPIAIHTRN
QQLHDQVEHQHLKRLVLDYEQREEAAERKNMQADLARRGINLKFVND
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atggatacaaagaaagaaacaaccaattcaaccaaacgagctatcttacgagctatcaac
ctatcaccgccacctactccaacccttcaatatcttgactcttctctcaagaagaatact
gcttacatcaaacggctcaagactggacttcatctctctgacaatgtacaggttttaatc
aaggaaactcaaactatcagtcttgataaatacctttctgaaatctcagtggctgctaat
gatggcttgtcaaagtgcaagaatgcaagtgagatttggggtgcagtcgaggttatctca
gcactccatcgtcgatttccgatcactttcacccaaccttttttacaacacttcactgcc
gggcttgctgttcctaacaaacaatacttggccagtctagccctcgatcaacgcgatcga
gaagaatcagcgcgtatcttacggcaacgcagtctgctacgctgtttagcagaattcgat
cttgtcggtctgattcacccctcaactgcgggtaaaaccatttctgagggtgaaactacc
ttcaacacattgaaagatttgttgacagccgacaaagaagctctggtcatacctttgcca
ttggcggtctctttttcaaaacagtttacgactctttactttccctcaaccgccccattc
gctactacccctgcagaggcatcagaagctagaaaggtggaatttgacgaggatatcatt
gctaattctgtgaaggaaaagttcggaaagctctttcggcaatacttcgatgcacttggt
cggaaagcggtcaaagatcacatcaaattacgagaaacggagaagcgcaacaccgaggca
gccattcgatctggtcaaatttttgaagaccgcattcaagcctttgaaaaactatccaag
gatcaagaaaaactttggacagggattcaaagtctttctgagactctgtctttgactcca
cctactttgcccgaagctagtgctagtagtcctacgaatgcaattacaggtacaggtccc
tctgcgttcggtggagtctctgacttgggaatttgggcggacgaagaggagaaaaagttt
tacgaagaattgattgatttgcgtgatgaggtcccggtgatgctactcggactcgatgca
ccggaaaagaaagcggagactagtgatccggtggaggctgagaaggatgagcaggcaaaa
ctcgaagaggaaatggagaaactcgctgtaaaagacctgtcgttgggatcagatgatcca
ttagaccacccagaagacgatgagcaggaagaaatcaatcaaaatgcttctgctggaccc
gtgcctccgcttactggagaggcactggcatccggacccgcggctagattgacagctctg
ttcaccagactcgatgatgtctatggcgcggaggccatcgatcgaataactgtcgaattc
gcgtatctcaactctaaagctgctcgcaatcgcctgatcaaacactttctcagtgtcaac
aaaaaccgaatggacctactgccgtatttcgctcgaatgaccgcgactttgtccaaatat
atgcccgacatgctcgcaggcctcctatccggtctcaaacatcagcttgaagacgaattc
agatacttgcagcgaaagaaatcggccagccaagacttctatgcccttcgaagcaaaaat
attcgttacatatccgaactcaccaagtttaacctcactccgtcacattccattctacat
tgcatcaaagtttgtgtggatgaattgacaggtccgaatattgaaaacctgtgtaactta
ctcgaaggttgcggtcggtgggtattgaggaatgagcgcactcgcgacaagatgacacaa
ttgttggaacaaatgaagcgaaagaaagctagtcagaatatggactctaggcaggtcatg
atgcttgaaaatgcgtattatcaggcagtggagtgtaatccacccgataggccggtcatc
gagcccaagatcaggacaccaatggagctgtttatgcgatatcagctctatgactgcttg
aacaaaaagtcagttgacaaggtaatcaaaatcttgaggaagcttcattgggatacacca
gaggtacccaaaatactgaaaagtatcttgacaaaggtatggaagatcaaatacggaaac
atttacctcttcgcaattgtggtacacgatctctcaaagtaccacagtgacttcacggtc
tcgattattgaccaagtgttggagaacgtcagattcgggatggagttgaatcttttcaaa
gataatcaacaaaggatcgcatcaatcaaatatttgggtgaattgtataactaccgtgtg
gtagactccaaagtgattttcgatactctgtggtcgtttgttacctttggccaccccgac
ggaagaccttcacctgagatgatttgtccaatcgatggacctgacgatttcttcagggtg
cgattgatatgcaccctccttcacacctgtggacactgttttgatcggggtagtctaaag
aaacgactgaataacttcttgacattcttcattatgtatctgaggtgcaaagagacgccg
ccgatggatgtggattttctacttcaagacaccatagaggaattacaaccgaaactcaac
atctatcttggttttgaacaagcggtgaaagcggtcgaagaaatgtatgcagccactagc
caaggtggggcaactgaagaagataaagctgacgacgatgagatgggtgatgaagacgaa
actcgtgatagagcagagcctggtgacggaggagatgatgacttgaatgacgatgcgaat
gacggtgacaccgtggtcgatgggggtgaaggccctgatggtgaggaggatttaccgcgc
aatacagtatcaaatgccatcagtaaagaagaagaagaagagtttgcgcgtgaattagcc
aagatgatcgcggagacagggggtggtggaactcagaccggtgctggtggtgcgaacgag
gctgctcgtaaaaatgagagaaacccgactagctcaagcttgttttcagatcagggctta
ccagtattgaaaaacatcttcaaacctggtggtagtggggctttggctttagcggaaggt
gatagagaaaatgaaggggataagatgacattcgctttgttgactaagaaaggaaacaaa
cagcagttgaagccgatgcagatcccatcaacagctccaattgcaatccatacacggaat
cagcaattgcatgaccaggtggagcatcaacacctgaagaggctggtcttagactacgag
cagagggaggaggctgctgagcgaaagaacatgcaagccgacctggcacgtcgaggtatc
aacttgaagtttgttaacgactaa
DBGET
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