Melampsora larici-populina: MELLADRAFT_95215
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Entry
MELLADRAFT_95215 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K14315
nucleoporin NDC1
Organism
mlr
Melampsora larici-populina
Pathway
mlr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
MELLADRAFT_95215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlr03019
]
MELLADRAFT_95215
Messenger RNA biogenesis [BR:
mlr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
MELLADRAFT_95215
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
18937173
NCBI-ProteinID:
XP_007406799
JGI:
Mellp1_95215
UniProt:
F4RCJ5
LinkDB
All DBs
Position
Unknown
AA seq
676 aa
AA seq
DB search
MNTQKLNIKDSYTRIYYVVLRRRACHFCVITFLTNLGLLWVSMLDGSPAVWNFLRVPFWI
MGGAVWASVTIPMMMLRRSQRQKRPSSCLTRYQSIVAVLGSAQHLAACVLLSISSLLLWT
CYVAAANALNEEPDLKLFKTMPGRGASQINERPIYLAASALFCAFYYSFLLTYEQRFPSK
RADQPEGLMISQRILRTLPTVFTRANRFSFLCSAPFLPFYLICRRYLIRAIVFSKYVQLT
KFIKPHLVMMIKFNSIFTFTSNLRLVMLNWLMVSCWEVVQAFWEVYLTQPLAISHFAEEP
NRCLLEGLRSVDMRIQYHAIVELAQISWSDPARRVTIFQDIRTQRKIFNAIVEECLSVIS
ATQRMVISRGEMPPPVESIGTQAMSTPLNTKTSDHGRPALVKDLPQLFNAQPQSDSLKKT
LLSKLLTSPAETGSETTSTPSIPTVQPTSNGYQMPEIFQSPRKLDRSIADTKSKSSSLAL
PPSTPKKEMIKAESFSRTQKIIPKGWEMVRKIRGVGSSERIRSLENWLFLPSVRMELRRT
LDNHRACALAVEAVTNLMCASLTEDQYGVAQDQIPRVMECLIECLETVKAFSLTICDEYG
ATSNHQDQNDDDQTDNGAKRIRDAELRESMDEFVTPLLTRLNDGSVGILNQFGPYLKEWS
FSPKTDKWIQARFKKN
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgaatacccagaaacttaatataaaggacagctacactcgaatttattatgtggtgttg
cgaagacgagcatgtcacttttgcgtcatcacttttttaacgaatttaggattgttatgg
gtatcaatgttagatgggtcgcctgctgtttggaatttcttacgagtgccattttggatc
atgggcggagcggtgtgggcgagcgtaacgatcccaatgatgatgttacgaaggagtcaa
cgtcagaagcgacccagctcttgtttgacacggtatcaatctatagtcgcggtccttggc
tctgctcaacatctcgccgcatgtgtccttcttagcatcagttccttactactttggact
tgctatgttgcagctgcaaatgcgctgaatgaggaacctgatttgaagttattcaaaact
atgccggggcgtggagcaagtcagataaacgaaaggccaatctaccttgcggcctcagct
ctcttctgcgcattttactactctttcttgctgacgtatgaacagaggtttccatccaaa
cgtgcggatcagcccgaaggcttgatgatatctcagcgcattttgagaactcttccaaca
gttttcacccgggccaatcgcttcagttttctttgctctgcccctttccttccattctat
ctaatttgtcgtcgatacctcattcgagcaatcgtattctcgaaatatgttcaattaacc
aagttcattaagccacatttagtgatgatgatcaagtttaattcaatctttacttttacc
tctaaccttcgtttggtgatgttgaactggttgatggtctcatgttgggaagttgttcaa
gctttttgggaagtttatttaacccaaccacttgcgatctctcattttgccgaagagcct
aaccggtgtttactcgagggtctacgttctgttgatatgcgcattcagtaccatgccatt
gttgaacttgcacaaatctcctggagtgatcctgctcgacgagtcaccatctttcaagat
atcagaacccagcgcaagattttcaatgcgattgttgaagaatgtcttagtgtgatcagc
gctacccaaaggatggtcatcagtcgtggcgaaatgccaccacctgtcgagtccattggt
acacaggctatgtccacaccactcaataccaaaacaagtgatcatggtcgtcctgcttta
gtaaaagatttaccacaacttttcaacgctcagccacaatcggattcactcaaaaagaca
ctactatccaaattgctcacatctccagcagaaactggatcagagactacatccactccc
agtattccgacagttcaacctaccagtaatggatatcaaatgcctgaaatctttcaaagc
cctcggaaactagatcgttcgatcgcggatacgaagagcaagtcatcttccttggcactt
cctccaagcacccccaagaaagaaatgataaaagcagagagcttttctcgtacccaaaag
atcatccctaaaggttgggaaatggttagaaaaattcgtggggtcggatcatctgaacga
attcgaagtcttgagaattggttattcttaccatctgtaagaatggaattgagacgaact
ttggataatcatagagcatgcgctttagctgttgaagctgtgacaaacttgatgtgcgct
tccttgacggaagatcagtatggagttgctcaagatcagataccaagagtgatggaatgt
ttaatcgaatgtttagaaaccgtgaaagctttcagtttaactatttgtgatgaatatggg
gctacttcgaatcatcaagaccaaaatgatgatgatcaaactgataatggcgcgaagagg
ataagagacgcagaattgagggaaagtatggacgaatttgtgactccattgttaacacgt
ttgaatgatggaagtgtaggtattttgaatcaatttggaccttatttaaaagaatggagt
ttcagtcctaagactgataaatggattcaagctcggtttaagaagaattga
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