Methanosarcina lacustris: MSLAZ_0056
Help
Entry
MSLAZ_0056 CDS
T03822
Name
(GenBank) Transcriptional regulator, TrmB family
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
mls
Methanosarcina lacustris
Brite
KEGG Orthology (KO) [BR:
mls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mls03000
]
MSLAZ_0056
Transcription factors [BR:
mls03000
]
Prokaryotic type
Helix-turn-helix
Other families
MSLAZ_0056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmB
Regulator_TrmB
HTH_27
GntR
HTH_IclR
HTH_34
Penicillinase_R
HTH_46
DnaD_N
Rrf2
DUF4930
PadR
Pepsin-I3
Motif
Other DBs
NCBI-ProteinID:
AKB73317
UniProt:
A0A0E3S2N7
LinkDB
All DBs
Position
complement(71508..72287)
Genome browser
AA seq
259 aa
AA seq
DB search
MFSQLNPQLISNLERLGLTENEAKVYVGVVSLREATAREVHELTNVPRAKIYEVLKMLAK
KGYLEVRQGSPTYFRAVDPKQVIGKIKDEFVNCTIETLDQLGELSYELPKTSPVWCIQSE
WGIKNRIRDIISGAKEELIVYSSSPEFLQEFEADLKKLEKTRRLTFIVNDLEKFKFLPFE
FRETTKEFANFISNIVIDEVQYDEQLFMIADGKESIGVHSTGNKREAVVIKLPVVCYLQK
MIYDRVLEPSFVKKYLNSV
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgttttcacaacttaatcctcagctaattagcaatctggaacggctagggctaactgaa
aacgaggcaaaagtctatgtgggggttgtcagtttgagggaggctacagccagggaagtc
catgaactcactaatgtgccaagagccaagatatacgaagttcttaaaatgctggcaaag
aagggttatctggaagtccgccagggctctccaacctattttcgtgcagttgaccctaag
caggtaataggcaagataaaagacgaattcgtcaactgtacaatcgagacgcttgaccaa
ctcggcgaattgagttatgaacttcctaaaacatctcctgtctggtgtatacagagtgaa
tggggaatcaaaaacagaatccgtgatattatcagtggggcaaaggaagagctgattgtt
tactcatccagccccgagttcttgcaggagtttgaggcagatcttaaaaaattggaaaaa
acacgccggttaacctttattgtgaatgatctggaaaagttcaaattcttgccctttgag
tttagagagactacaaaagagtttgctaactttataagtaatattgtaattgatgaggtt
cagtatgatgaacaactctttatgatagcggacggaaaagaatcaataggagtccacagt
acaggaaacaaaagagaagcagtcgtaatcaagcttccagtcgtttgttaccttcagaag
atgatctatgatagggtgcttgagccgagtttcgtcaaaaagtaccttaactctgtttga
DBGET
integrated database retrieval system
