Methanosarcina lacustris: MSLAZ_0465
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Entry
MSLAZ_0465 CDS
T03822
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
mls
Methanosarcina lacustris
Brite
KEGG Orthology (KO) [BR:
mls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mls03016
]
MSLAZ_0465
Enzymes [BR:
mls01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
MSLAZ_0465
Transfer RNA biogenesis [BR:
mls03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
MSLAZ_0465
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Corona_NS2A
Motif
Other DBs
NCBI-ProteinID:
AKB73726
UniProt:
A0A0E3S150
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All DBs
Position
complement(570117..570662)
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AA seq
181 aa
AA seq
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MIRTFIAVELNPSFGEQIRQIQERFSDFDLKFVNPEIVHITLKFLGDVDESMANSLAETL
DSLTCEPFEAQIEGIGVFPKPSNPKVLWLGAKGNFETLHDDVETVLKLFNFKEDERAFTA
HATLARVKSLNKDQKNAFADVLKELKYTKIGSIQVNKVLLKKSTLTPAGPIYETLHTAYL
D
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
ttgatcaggacttttatagcagtggaactgaacccaagtttcggggagcaaatccgccaa
atccaggagagattttcggattttgaccttaagtttgttaaccctgaaatcgttcacata
actctgaagtttcttggtgatgttgatgaatcaatggccaactctctggcagaaactctt
gattctcttacttgtgagcctttcgaagcacaaattgaaggcatcggggttttcccaaaa
ccttcgaatcctaaagtcctgtggctgggggcaaaaggaaacttcgagactcttcatgat
gatgtggaaactgtactgaaactttttaatttcaaagaggatgaacgagcatttactgct
catgctacccttgccagggtaaaatccctgaataaagatcaaaagaatgcttttgcagat
gtcctgaaagagttgaaatatacaaaaattggcagcattcaggtaaataaagtgcttctg
aaaaaaagcactctaacccccgccggtcctatttatgagaccctgcatacggcatatctg
gactga
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