Methanosarcina lacustris: MSLAZ_0678
Help
Entry
MSLAZ_0678 CDS
T03822
Name
(GenBank) tRNA pseudouridine 55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mls
Methanosarcina lacustris
Brite
KEGG Orthology (KO) [BR:
mls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mls03016
]
MSLAZ_0678
Enzymes [BR:
mls01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MSLAZ_0678
Transfer RNA biogenesis [BR:
mls03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MSLAZ_0678
Prokaryotic type
MSLAZ_0678
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_C_2
TruB_N
DKCLD
PUA
Pus10_C
DUF5736
Motif
Other DBs
NCBI-ProteinID:
AKB73939
UniProt:
A0A0E3S018
LinkDB
All DBs
Position
826924..827940
Genome browser
AA seq
338 aa
AA seq
DB search
MSSAGKLPAEVERTLVRKSGAWTNPSYGCYPEKRPILEYIEKGVVNIDKTSGPTSHEVAA
WVKAILGVKTAGHAGSLDPKVTGLLPTLLGKATKAVPALRLSGKEYICHLKLHRAMPPKL
IRQVCEEFTGPLYQMPPLKSAVKRVTRVRTIYYLEVLEIEGTSVLLRVGCEAGTYIRKLC
HDIGLALGCSGHMQWLRRTKAGPFTERTLVTLHELKDAYVSWEEEGDESELRRVIRPMES
AVSHLPKIILRDSAVDAICSGASLAVPGITSLDSNLTKGELTGLFTLKGEFVALAKAEMT
TKEILKASAGIAASPIRILLEAGTYPKGWTKKEERVQL
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccgccggcaaactaccagctgaagttgaaagaacccttgtccggaagtccggc
gcctggacaaatccatcctacggctgttatccggaaaagcgccctatccttgaatatatc
gaaaaaggagtggtgaatattgacaagaccagtggacctacaagccatgaagttgcagcc
tgggtaaaagctatccttggggtgaagacagccgggcacgcaggttctcttgatccgaag
gttacggggcttttgcctaccctgctgggaaaagctacaaaagccgtacctgccctacgc
ctctccggaaaagagtatatctgccatcttaagcttcacagggctatgcctccaaagctg
attcgccaggtctgcgaggaatttacaggtcccctttaccagatgcctcctctcaaatca
gctgttaaacgtgtcacaagggtaaggacaatctattacctggaagtgcttgaaattgaa
ggcacgtccgtgctcttacgcgttgggtgtgaggcagggacttatatcaggaaactctgc
catgatatcgggcttgctctgggttgcagcgggcatatgcagtggctccgcaggactaaa
gcaggaccgtttacggaaagaacccttgtaactctccatgaactgaaagacgcttatgtt
tcctgggaagaagaaggggatgagtccgaactgaggagggttatccgaccaatggaatct
gccgtatcccacctccccaaaataatcctgcgggacagtgcagtggatgcgatttgttca
ggggcttccctggcagttcccggcatcacaagcctagattccaatctgactaaaggggaa
cttacagggctctttaccttaaaaggagaatttgtggctctcgcaaaggctgaaatgact
accaaagagattctcaaagcttctgccggtatcgcagcttctcctatccgcatacttctg
gaggcaggaacttatccaaaaggctggactaaaaaagaggagcgtgttcagctctaa
DBGET
integrated database retrieval system
