Methanosarcina lacustris: MSLAZ_0806
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Entry
MSLAZ_0806 CDS
T03822
Name
(GenBank) Putative ski2-type helicase
KO
K03725
putative ATP-dependent RNA helicase [EC:5.6.2.-]
Organism
mls
Methanosarcina lacustris
Brite
KEGG Orthology (KO) [BR:
mls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mls03019
]
MSLAZ_0806
Messenger RNA biogenesis [BR:
mls03019
]
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Others
MSLAZ_0806
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Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5814
DEAD
Helicase_C
ResIII
DEXQc_Suv3
MGP3_C
Motif
Other DBs
NCBI-ProteinID:
AKB74067
UniProt:
A0A0E3S4G8
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All DBs
Position
997184..999661
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AA seq
825 aa
AA seq
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MTLWVLSSAEKSKIVVMTIKDRMKQPLSIAELHIKDSYKGPRPHKIRLLTGKNEEFIPPQ
QFIELLRSANRIMLTEGGNPANEVAFLEMLKAFQLSADRVKICKHCWLNKRFNFVNSKSI
KYHDELICEDCAKEELLRSIRSADTPYGEKSVDFLEKVLHKTRDLDRTIRMLSPERLDPE
FTRYDTIRTKPYESTVRVNNLPLAKKFKELLLQKSETLLPVQALSVEAGLLEGKNQFVVS
ATATGKTLIGEMAGIQNLLDKKGKMLYLVPLVALANQKYDQFTERYSKLGIITSIKIGAI
LIKTSQRVKMHTSPNADIIVGTYEGVDHMLRSGNADFLGKIGTVVIDEVHMLEDQERGHR
LDGLIGRLRYAAPEAQFIYLSATVAKPEAYAKKLGAQLILYDHRPVPLDRHLLFCQDDEK
SKLISQLAKEEYSMLSSKKHRGQTIVFTNSRRNCHKLAGALSIQASPYHAGLSQYERKKV
ETMFAKGELPVIVTTAALAAGVDFPASQVIFESLAMGIDWISVQEFLQMSGRAGRPDYHD
RGIVVLMPVPGKSYSSSQSDTEEEVAIKLLQGEMLSAGVEYGEAEQLEEVLASVAVTSSV
QDLRKIHSLMFGGFDLDKLVSRLQSYRFLEKKGNKVTPTLFGKIIAAHFLPVSKAFLIRD
AVLAENSPIKIVTNLEFFDAAYFKYSNQIGSSLHVNMPSRVFQGAALDIVFDGDSLSQLD
QKIRALMLNFASDFLTCTCRDSPYCGCAEQKFSENILRLRMEGLDPTQIIKILEGKYGIS
AYQGDVFGYLDGAVRNLDAVELIARVHSKKGVSEEAKKLKKKVQG
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgacgctctgggtcctaagctctgctgaaaaatcaaaaattgtagtgatgaccataaag
gacaggatgaagcagccgctttccatagctgagctccatataaaggacagttataaaggt
ccacggcctcataaaattaggcttcttaccggtaaaaatgaggaatttattcctccccag
cagttcatagagcttttgcgcagtgcaaacaggattatgctcacagaaggagggaaccct
gctaatgaagtggcttttcttgaaatgctcaaggcctttcaactcagtgcagatagggtg
aagatctgtaaacactgctggctcaataagcgttttaactttgtaaacagcaaatccatc
aagtatcacgatgagctcatatgtgaagattgtgcgaaagaagaattgcttcggtcaatc
cgttcagcagatacaccgtacggcgaaaaatcggttgatttccttgagaaggttctccac
aaaacaagagaccttgacaggacaatccgtatgctgagtcctgagaggctggatccggaa
ttcacacgttatgatactatcaggacaaaaccctacgaatccacagtcagggtaaataac
cttccccttgcaaaaaagttcaaagaattacttcttcagaaatccgagaccctgctgccc
gtgcaggcattgtctgtagaagccgggcttctggaaggaaaaaaccagtttgtggtttct
gcaactgcaaccggaaaaactctgattggggagatggcagggattcagaacctgctggat
aaaaaagggaaaatgctttacctggttccccttgtagctcttgcaaaccagaagtatgac
cagtttacggaacgttattcaaagctcgggatcataacctccataaagatcggtgcaatt
ctcataaagacctcccagcgggtgaaaatgcatacaagcccgaacgcggacataattgtg
gggacctatgaaggcgtagaccacatgctccgctcaggaaatgctgattttcttggcaaa
atagggactgttgttatagatgaggtccatatgcttgaagatcaggaaagggggcacagg
ctggacgggcttataggaaggcttcgctatgctgcgcctgaagctcagttcatctacctc
tctgcaaccgttgcaaaacctgaagcctatgcaaagaaactcggagcccagcttatcctc
tatgaccacaggccggttccccttgacaggcatctccttttttgccaggatgacgaaaag
tcaaaactgatttcccagcttgcaaaagaagagtattcaatgctctcttcgaaaaagcac
aggggacaaacaatagtttttacgaattccaggagaaactgccataagcttgcaggagcc
ctgtcaatccaggcttccccttaccatgcagggctttcacagtatgaaagaaaaaaggtg
gaaaccatgtttgcaaaaggggagcttccggtaatcgtgaccactgctgcccttgcagcc
ggagtggatttcccggcttcccaggttatattcgaatcccttgcaatgggtatagactgg
atttctgtccaggagttcctacagatgagcggaagggcaggcagacctgattatcatgat
cggggcattgtagtgctcatgcctgtgccgggaaaatcctattcaagctcacagtccgat
actgaagaagaggttgcaatcaagttactgcagggtgagatgctctctgcaggagtagag
tacggggaagccgaacagcttgaagaggtgcttgcatcagttgcagttacctcttcagtc
caggacttaaggaagatccattcccttatgtttgggggttttgacctggataaactggtt
tcccgcctccagagctacagattcctggagaaaaagggaaataaagtaacacctactcta
ttcgggaaaattattgcagctcatttccttcctgtctccaaagctttcctgattcgagat
gccgtgcttgcggaaaacagtcccattaaaattgtaaccaatctggaatttttcgatgct
gcatacttcaagtattcaaaccagatcggcagctctctgcatgtgaatatgccttcgagg
gtttttcagggggcagcccttgatattgtctttgatggagactctctgtcccagctggac
caaaaaataagggcacttatgctgaactttgcctcggattttttaacctgcacgtgcaga
gactcaccttattgcggatgcgcagaacagaagttttcagagaatattctccggctgcgt
atggaagggctggaccctactcagataattaagatacttgagggtaagtacggcatttcc
gcataccagggcgatgtttttgggtatctggatggtgcagtacgcaatcttgatgctgtg
gaactgatcgcaagggtccactcgaaaaagggagtctcagaagaagcaaagaagcttaag
aagaaagtccagggctga
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