Methanosarcina lacustris: MSLAZ_0888
Help
Entry
MSLAZ_0888 CDS
T03822
Name
(GenBank) tRNA pseudouridine 55 synthase Archaea
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
mls
Methanosarcina lacustris
Brite
KEGG Orthology (KO) [BR:
mls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mls03016
]
MSLAZ_0888
Enzymes [BR:
mls01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MSLAZ_0888
Transfer RNA biogenesis [BR:
mls03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MSLAZ_0888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pus10_C
Pus10_THUMP_arc
THUMP
Motif
Other DBs
NCBI-ProteinID:
AKB74149
UniProt:
A0A0E3S0I8
LinkDB
All DBs
Position
complement(1098175..1099470)
Genome browser
AA seq
431 aa
AA seq
DB search
MDVLEISKKILHEGPICDHCMGRQFAKLSTGLSNRERGQAMKLALVLEGDRIYKSENDDS
LLKELVPCSARARTTLRIEGEDEQCWVCLDQFKKLDGWAEKAAKALEGLEYSTFLVGTKV
SGLLSENEEILWAEAGTAYAEQLKSELNREVGKRIAELVKKEVDFENPDIVITLDLATTR
FELQVRSVYIYGRYLKKVRGIPQTRWPCRTCKGRGCEICGFTGKQYQESVDELIKGPVVE
AFEAVDTTFHGSGREDIDALMLGSGRPFVVEAKSPVKRMADLEALTSRINESTAGKVEVR
DLRFVEKGMIEILKSSKADKTYKLKVTFKEPVSEEKLKSCLESLSGTEIAQQTPQRVVHR
RADLVRKRYVHSITLDELTDDGRASITVNCEGGLYVKELVSGDEGRTKPSLTGLLGVQAL
VENLDVVNVEI
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggatgtacttgaaatttcaaaaaagattctgcacgaaggccctatctgtgaccactgc
atgggccgtcagtttgcaaaattatccacaggcctcagcaacagagagcgtgggcaggca
atgaaactcgctcttgtccttgaaggggaccgtatttacaaaagtgaaaatgacgactca
ctcttaaaggaacttgttccctgcagtgcccgtgcaaggacaactctccgaatcgaaggt
gaagatgagcagtgctgggtctgccttgaccagttcaaaaaactggatgggtgggcagaa
aaagctgcaaaagctctcgaaggtcttgagtactccaccttcctcgtggggacaaaggtc
agcgggcttctgagtgaaaacgaagagatcctatgggctgaggcagggactgcctatgcc
gagcagttgaaatccgagcttaaccgggaagtaggcaagcgaattgcagaactggttaaa
aaagaagtggattttgagaacccggatattgtgatcacccttgaccttgcaacaaccagg
ttcgagcttcaggtccgttcagtatatatctacgggcgctacctcaaaaaagtccgcgga
atcccacagacccgttggccctgcaggacatgtaagggcagaggctgcgaaatctgcggg
tttaccggcaaacaatatcaagagtccgtagacgagcttatcaaaggccctgttgtcgaa
gcatttgaggctgttgacacgacttttcacggttcgggcagggaagatatagatgccctg
atgctcggaagcggcaggccctttgtggtggaagcaaagtcccctgtaaagcgtatggcc
gaccttgaagcgcttacttccagaattaacgagagtactgcaggaaaagttgaggtaagg
gaccttcgttttgtcgagaaaggcatgattgagatcctgaagagctcaaaggcggataaa
acttataagcttaaagttacatttaaagagcctgtttcagaggaaaagcttaaatcctgc
ctcgagtctttgagtggcacagagattgcccagcagactccacagcgagtagttcacagg
cgagcagatcttgtccggaaaaggtacgtgcacagcatcacgcttgacgagctgacagat
gatggtcgtgctagcataaccgtaaactgtgaaggtgggctgtacgtaaaagagcttgtt
tcaggggacgagggcaggacaaaaccaagccttacagggcttttaggagtccaggcgctt
gtggaaaatcttgatgtagttaacgtcgaaatttaa
DBGET
integrated database retrieval system
