Methanosarcina lacustris: MSLAZ_1469
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Entry
MSLAZ_1469 CDS
T03822
Name
(GenBank) tRNA pseudouridine 13 synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mls
Methanosarcina lacustris
Brite
KEGG Orthology (KO) [BR:
mls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mls03016
]
MSLAZ_1469
Enzymes [BR:
mls01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
MSLAZ_1469
Transfer RNA biogenesis [BR:
mls03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MSLAZ_1469
Prokaryotic type
MSLAZ_1469
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AKB74730
UniProt:
A0A0E3WSI4
LinkDB
All DBs
Position
complement(1861912..1863228)
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AA seq
438 aa
AA seq
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MEVPKIEKQIGMNLYFTDTDGLGGQLRQEIEDFIVKEVTNREEGQEGKYLILELTKRDWD
THHFTRTLAKILQVSQKRISVAGTKDKRALTTQKISIFDTDASEIERIHLKDVELKVLGR
SRKSVELGDLWGNDFIITIRNIESSLDETGSLLKKTTEEILAQGGVPNFFGVQRFGSVRP
VTHLVGKDIVEGNFEKAALRYIAEPFPDEPEETKKARQFVKETRDYKEGLKTYPLRLGHE
RAMMNHLIANPEDYAGAFRVLPQNLYRMFVHGYQSYIYNIIICRRIDRDIPLNTAVDGDL
VCFRNEAGLPDSSKTEKVTAETVTAMNRLIKLGRAFITAPLPGFKTAFASGVPGEIESEV
LKELEVSLEGFNIEEFPEMSSKGIRREVLLQVEPKFEVSEDELNPGKSKAVLEFMLPKGS
YATTVLREYMKVDPRQMS
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggaagttccgaaaattgaaaaacagataggaatgaatctttactttactgataccgac
gggcttggagggcagctccgccaggaaatagaggatttcattgtaaaagaggtcacaaat
agggaagaagggcaggagggaaaataccttatcctcgaacttacaaaacgggactgggat
acacaccattttacccggaccctcgcaaaaatcctgcaggtaagccagaaaagaatcagt
gttgcaggcacaaaagacaaacgggcactcaccacccagaagatcagcatatttgatacc
gatgcctcggaaattgaaagaatccatttaaaagacgtagaactaaaagtgctgggccgc
tcccggaagtccgtggaacttggagacctgtggggaaatgatttcataattacaatccgg
aatattgagagttctctcgacgagacaggctctctgcttaaaaagacaactgaagaaatt
ctggctcagggtggcgttcccaacttcttcggggtccagcgtttcggctctgtccgccct
gtgactcatctggtaggaaaagacattgttgaaggaaactttgaaaaagcagccctccgc
tatattgccgaacccttcccggatgaaccggaggagacaaaaaaagcccgccagtttgtc
aaagaaacccgcgattataaagagggcctgaaaacctatcccctccgcctgggtcacgaa
cgggcaatgatgaaccacctgatagcaaacccggaagattatgccggagctttccgcgtg
ctcccccagaacctctacaggatgttcgtacatggctaccagtcctatatttataacata
attatctgccgccggatcgaccgcgacatccccttaaatacggcagtggacggagatctc
gtctgcttcaggaatgaagccggccttccggattcttcaaagactgaaaaagtcacagca
gaaaccgtaaccgccatgaatcgcctgataaagctaggcagagcctttattacagccccg
cttccgggctttaagactgcatttgcatccggagttccgggagaaatagaaagcgaagtc
ctcaaagaacttgaagtctctctcgaaggctttaatatcgaagagttcccggaaatgagc
tcgaaaggcatccgccgggaagtcctcctgcaggtggaaccgaaatttgaggtctcggaa
gacgaactgaaccccggtaaatcaaaggcagtgcttgagttcatgctgccaaaagggagt
tatgctacaaccgtgctgcgggaatatatgaaagtggacccgcggcagatgagctaa
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