Methanosarcina lacustris: MSLAZ_1791
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Entry
MSLAZ_1791 CDS
T03822
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mls
Methanosarcina lacustris
Pathway
mls03410
Base excision repair
mls03430
Mismatch repair
mls03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mls00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MSLAZ_1791
03430 Mismatch repair
MSLAZ_1791
03440 Homologous recombination
MSLAZ_1791
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mls03400
]
MSLAZ_1791
DNA repair and recombination proteins [BR:
mls03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MSLAZ_1791
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MSLAZ_1791
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MSLAZ_1791
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
DHH_CID
Motif
Other DBs
NCBI-ProteinID:
AKB75052
UniProt:
A0A0E3S6U5
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All DBs
Position
2302451..2303788
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AA seq
445 aa
AA seq
DB search
MSELEKLINLAKNAADKIRKHRFVRIVSHNDADGLTSAGIMALALLRAGIGFQLSIAGKL
DESVVEEVNSSISQGDLVIFCDMGSGQPELIGKVAADVVVLDHHQPVGKSPAKAVVNAHM
VGIDGATDISASGTCYLVARELGTGNIDLAGLAIAGAVGDRQLFQTANAFILEEALKAGV
VSIRKGLKVGDGDLVDVLAYSTEPFLDITGYPEKAAEFLNQLGLSGNIENLSAEDISKLA
SAIALKLVKQASPEAIEAVIGDTILLNRELVPNVYDFISILNTCGKQKVYGLALALCLKD
SAIVDEALSLTKEHEKNLAVDVRENVGKIRKGENIWYINTIDALSTGSLATTVVRYLHPE
LPFICVNESEGILKVSSRGTRELVSKGLDLAFALREAAGAVGGSGGGHSVASGAAIPLGS
AEEFLSIADRIIGDQLSKNASGKAK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgagcttgaaaaactgattaaccttgcaaaaaatgcagccgataaaatccggaag
catagatttgtgcgcatagtttcacataatgatgctgatgggctgacttcagccgggatc
atggccctggccctgctaagggcaggcatcggtttccagctttcaatagcaggaaaactg
gatgagtctgtggtcgaagaagtgaacagtagcatatctcagggagacctggtcattttc
tgtgatatgggcagtggacaacccgaacttataggcaaggtggcggccgacgtcgtggtg
cttgaccaccaccagccagtcggaaagtcccctgcaaaagccgtggtaaacgcccatatg
gtgggaattgacggggcgacggacatctcggcttccggcacctgttatcttgtagccagg
gaacttgggaccggaaacattgaccttgcaggactggcaattgcaggtgcagtcggggac
aggcagcttttccagactgccaatgcttttattctggaagaagccttgaaagcaggagtt
gtgtcaatcaggaaagggctgaaggtaggggatggagaccttgtggatgtgctcgcatac
agcacagaaccttttctggatataaccggctaccctgagaaagcagcggaatttttaaac
cagctggggctctccggaaacattgaaaacctgtctgcggaagatatctcaaaacttgcc
agtgccattgccctgaaacttgttaaacaggcaagccctgaagcaattgaagccgtcata
ggagataccatcctgctgaatcgggagctggtgcccaatgtatatgatttcatctccatt
ctcaatacctgcgggaagcagaaggtttacgggcttgccctggctctctgcctgaaagac
tcagctattgtcgatgaagctctttcccttacgaaggagcatgaaaagaaccttgcagtg
gatgtccgggaaaatgtagggaaaattcgcaaaggggaaaatatctggtatatcaacaca
attgatgccctttccacaggaagccttgccacaaccgtagtcagataccttcaccccgaa
ctccctttcatctgtgtaaacgagtccgagggaatcctgaaagtttcttcaaggggtacc
cgtgaacttgtatcaaaaggtctagaccttgccttcgccctcagggaagctgcaggcgca
gtcggcggaagtggaggcgggcatagtgtcgcatccggagctgcaattcctctgggaagt
gcggaggagttcctgagcatcgcagaccggatcataggagaccagctcagtaaaaacgcc
agtgggaaggcaaagtaa
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