Methanosarcina lacustris: MSLAZ_1803
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Entry
MSLAZ_1803 CDS
T03822
Name
(GenBank) Shwachman-Bodian-Diamond syndrome protein
KO
K14574
ribosome maturation protein SDO1
Organism
mls
Methanosarcina lacustris
Pathway
mls03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mls00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
MSLAZ_1803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mls03009
]
MSLAZ_1803
Ribosome biogenesis [BR:
mls03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
MSLAZ_1803
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SBDS_N
SBDS_domain_II
SBDS_C
EFG_C
MIase
Motif
Other DBs
NCBI-ProteinID:
AKB75064
UniProt:
A0A0E3S2L8
LinkDB
All DBs
Position
2316219..2316911
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AA seq
230 aa
AA seq
DB search
MVSLDEAVTARLKRGSKHFEVLVEPEGALAYKRGEEVSLEDILAVETIFEDANKGDRAAE
SDIIHSFETTDPFEIAAVILKSGELQLTADQRKRILEEKKKKVIYTISRNAINPQTRAPH
PPARIERAMEEAKVHIDPLKSVDQLVAITMKAIRPLIPIRFEEVNIAVKIPPEYAPKAYG
DISKAGSITKEEWQRDGSWVAVVRIPAGVQTDFYALINHLTKGEAQTKLL
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccctggacgaggcagtgactgcccgacttaaaagaggcagcaaacatttcgaa
gtactggtcgagcccgaaggggctctggcctataagcgaggagaggaagtaagcctcgaa
gacattcttgcagttgaaactatcttcgaagatgcaaacaaaggggatcgggcagcagag
tccgatataatccactcttttgagacaaccgacccctttgagattgctgccgtgatcctg
aaaagcggtgagcttcaacttaccgccgatcagagaaaacgaattcttgaagagaaaaag
aaaaaggttatctataccatttccagaaatgctataaaccctcagactagagcaccgcat
cctcccgcacgaatcgaaagagcgatggaagaggcaaaggtgcacatagaccctttaaaa
agcgtagatcagctggtagctattacaatgaaagccattcgcccgcttatcccgatacgc
tttgaagaagtcaatattgctgtgaaaatccctcccgaatatgcccccaaagcatacgga
gatatttccaaagccggaagcataacgaaggaagaatggcagcgtgacggctcatgggtt
gcagtagtgcggattcctgctggagtccagactgatttttacgctcttataaatcatctc
acaaagggagaggctcagactaaacttttataa
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