KEGG   Methanosarcina lacustris: MSLAZ_1806
Entry
MSLAZ_1806        CDS       T03822                                 
Name
(GenBank) putative exosome complex exonuclease 2
  KO
K12589  exosome complex component RRP42
Organism
mls  Methanosarcina lacustris
Pathway
mls03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mls00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MSLAZ_1806
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mls03019]
    MSLAZ_1806
Messenger RNA biogenesis [BR:mls03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     MSLAZ_1806
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     MSLAZ_1806
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-ProteinID: AKB75067
UniProt: A0A0E3S6V8
LinkDB
Position
2319234..2320025
AA seq 263 aa
MSEIIATLKKDYIYSLMVKGKRQDGRGFKDFRDIKLETNIISKAEGSAKVILGNTQVLVG
VKLQKGTPFPDHLDEGVIMTSLELNPIASPEYEPGPPREEAIEMARVVDRGIRESGAIDI
KKLCITVGESTWIIYIDIHVLNNDGNIIDASCLAAIAALMTTVVPNEQQGLGEDVSLPMK
EIPVGITLAKVGSKLMIDPSLDEEAVCETKLTIVSSSEGSVSGMQKMGSTPLSEAELFEA
IDLAIEKAAELRKLYLEGLAKSE
NT seq 792 nt   +upstreamnt  +downstreamnt
atgagtgaaattatagccacacttaagaaggactatatttacagcctgatggtcaaagga
aaacgtcaggatgggcgcgggtttaaagacttcagggatatcaagctcgaaacaaacatt
atttccaaagccgaaggttctgcaaaggttatcctcgggaacacccaggttcttgtaggt
gtgaagcttcagaaaggaactccatttccagaccatctggatgaaggagtgattatgacc
agccttgaactgaacccgatagcttctcccgaatatgagcctgggcctccaagagaagaa
gcaatcgaaatggcaagggtcgttgacaggggaatcagggaatcaggcgcaattgatata
aagaagctttgcataacggtgggagaatccacatggattatctatatagacatccatgtc
ctgaacaatgatggaaatatcattgatgcatcctgtcttgctgcaattgcagctctgatg
accaccgttgtccctaacgaacagcagggactgggtgaggatgtgtcccttccaatgaaa
gaaatacctgttggtataactcttgccaaggtcggctcaaaactgatgatagatccctcc
cttgacgaggaggcagtttgcgaaacaaaactgaccatagtttccagttcggaagggtct
gtttcaggcatgcagaaaatggggtctactcctctttctgaggcagagctgttcgaggcg
atagacctagcgatcgaaaaggcagctgaactcaggaaactttacctggaagggcttgca
aaaagtgaataa

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