Methanosarcina lacustris: MSLAZ_1806
Help
Entry
MSLAZ_1806 CDS
T03822
Name
(GenBank) putative exosome complex exonuclease 2
KO
K12589
exosome complex component RRP42
Organism
mls
Methanosarcina lacustris
Pathway
mls03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mls00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MSLAZ_1806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mls03019
]
MSLAZ_1806
Messenger RNA biogenesis [BR:
mls03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
MSLAZ_1806
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
MSLAZ_1806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
AKB75067
UniProt:
A0A0E3S6V8
LinkDB
All DBs
Position
2319234..2320025
Genome browser
AA seq
263 aa
AA seq
DB search
MSEIIATLKKDYIYSLMVKGKRQDGRGFKDFRDIKLETNIISKAEGSAKVILGNTQVLVG
VKLQKGTPFPDHLDEGVIMTSLELNPIASPEYEPGPPREEAIEMARVVDRGIRESGAIDI
KKLCITVGESTWIIYIDIHVLNNDGNIIDASCLAAIAALMTTVVPNEQQGLGEDVSLPMK
EIPVGITLAKVGSKLMIDPSLDEEAVCETKLTIVSSSEGSVSGMQKMGSTPLSEAELFEA
IDLAIEKAAELRKLYLEGLAKSE
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaattatagccacacttaagaaggactatatttacagcctgatggtcaaagga
aaacgtcaggatgggcgcgggtttaaagacttcagggatatcaagctcgaaacaaacatt
atttccaaagccgaaggttctgcaaaggttatcctcgggaacacccaggttcttgtaggt
gtgaagcttcagaaaggaactccatttccagaccatctggatgaaggagtgattatgacc
agccttgaactgaacccgatagcttctcccgaatatgagcctgggcctccaagagaagaa
gcaatcgaaatggcaagggtcgttgacaggggaatcagggaatcaggcgcaattgatata
aagaagctttgcataacggtgggagaatccacatggattatctatatagacatccatgtc
ctgaacaatgatggaaatatcattgatgcatcctgtcttgctgcaattgcagctctgatg
accaccgttgtccctaacgaacagcagggactgggtgaggatgtgtcccttccaatgaaa
gaaatacctgttggtataactcttgccaaggtcggctcaaaactgatgatagatccctcc
cttgacgaggaggcagtttgcgaaacaaaactgaccatagtttccagttcggaagggtct
gtttcaggcatgcagaaaatggggtctactcctctttctgaggcagagctgttcgaggcg
atagacctagcgatcgaaaaggcagctgaactcaggaaactttacctggaagggcttgca
aaaagtgaataa
DBGET
integrated database retrieval system