Methanosarcina lacustris: MSLAZ_1946
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Entry
MSLAZ_1946 CDS
T03822
Name
(GenBank) ATP-dependent DNA helicase pcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mls
Methanosarcina lacustris
Pathway
mls03420
Nucleotide excision repair
mls03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mls00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MSLAZ_1946
03430 Mismatch repair
MSLAZ_1946
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mls03400
]
MSLAZ_1946
Enzymes [BR:
mls01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MSLAZ_1946
DNA repair and recombination proteins [BR:
mls03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MSLAZ_1946
MMR (mismatch excision repair)
Other MMR factors
MSLAZ_1946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
DUF2800
AAA_22
DEAD
Dna2
SinI
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AKB75207
UniProt:
A0A0E3S749
LinkDB
All DBs
Position
complement(2535225..2538536)
Genome browser
AA seq
1103 aa
AA seq
DB search
MLEELLTTLTPRQKEAVEHTSGPLLILAGAGTGKTTAITGKIAWMIEKQEIKPEKILALT
FSREAARNMEKKIHGLLGQGTDVKVSTFHAFCAELIRDNSEKCGVLEQFTIFEDIDSAIL
LYKELGTTPRNAALYSSTIAKAKDLNISIDEFKAYLETKKESLLGFAEESRLEQFYTECK
INLNTFHLKDKGQQKALKNEKKNWQEFIGLYEEYRKYADFTHAWVTYEERKRALNCLDYG
DLNRIALEFLNTCGTAELNDTYTHIIVDEFQDTNYVQFELIKHLTAREQNITVVADANQS
IYAFRGAYSNNIEDFKKQFGISERDIVSLDVSFRSTNKILRVAHKLISQNYPEDRKNECI
LLKNCNNNEGGNVVIQETKDEGEEARKIVEQIQSYIEKGILLNEIAVLYRTHNQGKQIRQ
ALQRREIPVVVKDDADYLKQPEIKTVLSYLYILNNLTDPTPRGTEAWWRLFHYNNGLENS
DSIHIGEYIKKNKISFQEAIYHHLDEIRLSEKGCSTIGKVKETIRVLGEKNLLDVSDRLL
EIYDHSGLVRHLNRLDTLKAREAFLNLRNLHEMAKNYEQFYNRELFGFIDYLEILDEMGG
NPASAKLREDDAVSLMSIHAAKGLEFRVVFVTSMAKDKFPLFRGGQEPLIPLEMMSQYKD
LFYADFGSASKLETAIKGRKKEIKLEEERRLCYVAFTRAKEDLILILSLEYGGKEREPSE
FLMEIGYNHWRDIGTAPADGTGSDVEKEIAFDELSLSYRKDLEVKTAGLVKDNELEREKN
KCVRLLIEALDKDLEEAVHYLMVYRALRDGGCGDYLEELKQKWDLIDPAEKAGEILSKME
TRSNGLRFNPEVFGFSFSALKLYENCPKQYELQEILRMPGRKNEDSTGAMAKGSFVHEVL
EIAVKEKVSEKQALYEIVENLHKKPEWMYVDLESTLPLFEVFWLRNKDRISNNLMVEKWF
SVPIEGFVFRGKIDRVDLLDSSGKEVEIIDYKTGKYDVSPEDRSRQLLLYAKGFEHMHPE
YRVKRLTLDMLALEKPRVFELQEDGKYGSIEGRVSPLDSGAIDVMVQTARNIAHDYEHGF
KETEDPEICKECGFRLYCDGINL
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgttagaagaactcctcacaaccctcactcccaggcaaaaagaagcagttgaacacact
tcaggccctctattaattcttgcaggtgcaggcacgggtaagacaactgccataactggc
aaaattgcctggatgatcgaaaaacaggaaattaagccggaaaagattcttgcccttact
ttttcgagggaagctgccagaaatatggaaaagaaaatccatgggcttttagggcaggga
actgatgtgaaggtgagtacttttcatgctttctgtgccgaattgataagagataattct
gaaaagtgtggggttttggagcagtttactatttttgaggacattgattcagctatcctg
ctttataaggaactgggcaccactccgagaaatgcagctttgtattccagcacaatcgca
aaggcaaaagacctcaacatttcgattgatgagttcaaagcttatcttgaaacaaagaag
gagtctctgcttgggtttgctgaagaaagcaggttggagcagttttatacagaatgcaag
atcaacttgaacacgtttcatttaaaggataaaggccagcaaaaagccctgaaaaatgaa
aagaaaaactggcaggaattcatcggactttatgaggaataccgaaaatatgctgatttc
acccacgcctgggtaacatatgaagaaagaaagagagccctaaattgccttgattacggg
gacctcaaccgaattgcccttgagttcttgaatacctgcggcacagcagagcttaacgat
acctatactcacatcattgtggacgagttccaggatactaactacgtgcagttcgaactt
attaagcacctgaccgcacgggagcaaaatatcacggttgttgcggatgcgaaccagagt
atctacgcttttcggggtgcatactcaaacaatattgaggattttaaaaagcaattcggg
atttcagaacgggatatagtgtctctagatgtgagtttcaggtccacgaacaaaatccta
agggttgctcacaagctgatctcacagaattatcccgaagaccggaaaaacgagtgcatt
ctcctcaaaaactgcaacaataacgagggcggaaacgtcgtcatccaggaaacaaaagac
gaaggggaagaagcaagaaaaatcgtcgagcagatccaatcttatatcgaaaagggtatt
ctcctaaacgaaattgcagtcctttatcgaacccataaccagggtaagcagatcaggcag
gcgctccagaggcgggaaatacctgtagttgtgaaagacgatgctgattatctaaaacag
cccgaaatcaagaccgtgctttcctatctctacatattaaataacctcacggacccgacc
cccagaggaacggaggcatggtggcggctctttcattacaataacggcctggagaacagt
gactccattcatataggggagtacatcaagaaaaacaagatttcttttcaggaagctatc
taccaccatctcgatgagatcaggttaagtgaaaaagggtgcagtactattggaaaggtt
aaagaaacaatcagggtccttggcgagaaaaacctgctggatgtttctgatcgtttgctt
gagatttatgatcacagcgggcttgtgaggcaccttaacaggctggatacgctgaaagcc
agggaagctttcctgaacctgagaaacctgcacgaaatggcaaagaattatgaacaattc
tacaacagagagctttttggcttcattgattatctggagatcctggatgaaatgggaggc
aaccctgcatcggcaaagctcagggaggatgatgctgtaagcctgatgagtatccatgca
gcaaaggggcttgaattcagggtcgtttttgtgaccagcatggcaaaggacaaatttcct
ctattcaggggtgggcaagaacctctgattccactggaaatgatgagtcaatataaagat
ttattttatgcagattttggttctgcttcaaagctcgaaacagcgatcaagggacgcaaa
aaagaaatcaaacttgaagaagaacgcaggctctgctatgtagcctttacacgggcaaaa
gaagatcttatactaattctttctctggaatatggcggtaaggagagagaaccttctgag
tttctaatggaaatcgggtataaccactggcgggatataggcaccgctccagctgatggg
acaggaagtgatgtggaaaaggaaatcgcttttgatgagttgagcctgtcttaccggaaa
gaccttgaggttaaaaccgcaggccttgtaaaggacaacgagcttgaaagagagaaaaac
aaatgtgttcgactgcttattgaggctcttgataaggatcttgaagaagctgtacactac
ctgatggtatacagggctctaagagacgggggatgtggggactatcttgaagaattgaag
caaaaatgggacctgatagatccggctgaaaaagcaggagagatcctctcaaaaatggag
accagaagcaacggcttgaggttcaatccggaagtgtttgggttcagcttttcagctttg
aagttgtacgaaaactgcccgaaacagtatgaattacaggaaatcctgcgcatgccaggt
cgaaagaacgaagattcgacaggagccatggcaaagggaagtttcgtgcatgaggtgctt
gaaattgcagttaaagaaaaagtttcggaaaagcaggcactctacgaaatagttgaaaat
cttcataaaaagcctgaatggatgtatgtggacctggaatccactcttcctctttttgaa
gtattctggctccgaaacaaagaccggatttcaaataatctcatggttgaaaaatggttt
agtgttcctatagaaggatttgttttcaggggaaagatcgacagagttgatttacttgac
tcttccggaaaagaggttgaaatcatcgattataaaaccggaaagtacgatgtgagcccc
gaagaccgttcaaggcagctcttactatatgcaaaaggttttgaacacatgcatccggaa
taccgggtgaagcggctcacgcttgacatgctggccctggaaaaacctcgcgtttttgag
ttgcaggaggatggaaagtacggcagcattgaaggccgggtaagtccccttgacagtggg
gcaattgatgtcatggtccaaactgcacgaaatattgcccatgattatgagcatgggttt
aaggagacagaggatcctgaaatctgcaaggagtgtgggttcaggttgtattgtgatggc
atcaatctgtaa
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