Methanosarcina lacustris: MSLAZ_2176
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Entry
MSLAZ_2176 CDS
T03822
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mls
Methanosarcina lacustris
Brite
KEGG Orthology (KO) [BR:
mls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mls03032
]
MSLAZ_2176
03400 DNA repair and recombination proteins [BR:
mls03400
]
MSLAZ_2176
Enzymes [BR:
mls01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MSLAZ_2176
DNA replication proteins [BR:
mls03032
]
Prokaryotic type
DNA Topoisomerases
MSLAZ_2176
DNA repair and recombination proteins [BR:
mls03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MSLAZ_2176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
OEP
Auto_anti-p27
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AKB75437
UniProt:
A0A0E3S7M6
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All DBs
Position
2838138..2840645
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AA seq
835 aa
AA seq
DB search
MTVVAFAEKNKAAAQIASILGDGEVDKISVEGLPAYEFKWKGEEWFVMGLSGHIMSYDFP
EKYNKWNEVDPGVLLGIYPEKFVTRAEYAAAVKNLAKRADKIILACDYDREGENIGFEAK
TLSEEVTNVPISRARFSALSPKEVKKAFENPVEPDYNMAMAAEARQILDLKMGAAFTRFV
TLSVREKARTKDILSIGPCQTPTCGFVYEREKIIRAFETKDFWKITAIFVAKGGEFEGIH
RAGNIYEKEKAVEIFKRLKGAKEGLVVKKTVKEAKTSPPNPLNTTEYLKRASKFLGISPE
AALEVAEQLYLAGFTSYPRTETNKYADDFDFKSLVFDFARQTEYKPFAESILSAPIVPKN
GEKDAHDHPPIHPIRAAARREISAAVNIPQAAEAYDLIARHFLANLMPAAVFEKTHLQLH
VKEEPFDSSGTVLKDAGWLEVYPFENKKDKLLPFVEEKEKVDIKKLSNTKSKTSPPKKLT
EAELLTLMDKHGIGTKATAPSHIETNKKRGYFETKGKTVSILDTGFTLMEGLSLTVPILI
RPDIRSKIEALIQEVEDGKKEFEAALDEGTALIKEMYAQLEANKKELTSSIAGTIKDEAA
LEDKKNYIGTCKVCGHVLKIVQTDTGRFVGCSGYPDCRNSFPLPKTGALNVLRSKECKKE
GAAVLKVGNKYNWAVGIGPCFKCDLEKECYPPETVGPCPECDGSMFLISFKDSRFLGCTK
RCGYTHSVPKTGKLTLLDKTCGTCGWKLFRLKEEGDSPEEDFCVNRRCTEGIKYWRKTGP
RNESRGQAKASGDSVSRPEAGSTARSTARSTARPTPCKVSKGPSITGERKEDRGK
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgacagttgtcgcatttgcagaaaagaataaggcagcggcccagattgccagcatcctg
ggcgatggggaagtagataaaatctcagtggaagggctgcctgcttacgagttcaagtgg
aaaggggaagagtggttcgtgatggggttatccgggcacatcatgagctatgattttcct
gaaaaatataacaaatggaatgaggttgaccccggcgtactccttggaatttatcctgaa
aagttcgtaacaagggcagagtatgcagctgcagtgaaaaacctggcaaaaagagcagac
aaaattatccttgcatgcgactacgacagggaaggggaaaacatagggtttgaagccaag
accctttcagaggaggttacaaacgtgccaatctcaagggcacgtttttcggccctttcc
ccaaaagaagtcaaaaaagcttttgaaaaccctgtcgaacctgactacaacatggcaatg
gctgcggaagccagacagatccttgacctgaagatgggggcagcttttacgcgttttgtc
acgctttcggtcagggaaaaagcaaggacaaaagacatcctttcaattgggccctgccag
acgcccacctgcggttttgtgtatgaacgggaaaagataatccgggcttttgagacaaag
gacttctggaagattactgcaatttttgttgcaaagggcggggaatttgagggtatccac
agggcaggaaacatctatgaaaaagaaaaggcagttgagatcttcaagaggttaaaaggg
gcaaaagaaggccttgtcgtaaagaagacggtaaaggaagcaaagaccagccctccaaac
ccgcttaacaccacagagtatctgaagcgggcttcaaagttcctgggaatcagcccggaa
gctgcccttgaagttgcagaacagctctaccttgcaggatttacaagctacccgaggaca
gagaccaacaaatatgcagatgattttgattttaagtcgctggtctttgattttgcaagg
cagaccgagtataagccctttgccgagtcaatcctctctgccccgatagtgccgaaaaac
ggggagaaagacgcacacgaccaccctcctatccaccccatccgggcggctgcaaggaga
gaaatcagtgctgcagtaaacatcccgcaggcagcagaggcctatgaccttattgcaaga
catttcctggcaaacctgatgcctgcagctgtttttgaaaagacccaccttcaactgcac
gtgaaggaagaaccttttgattcctcggggactgtgcttaaagatgcgggatggctcgaa
gtttatccttttgaaaataaaaaagataaacttctcccgtttgtagaggaaaaagagaaa
gtagacataaaaaagctgagcaacacaaagtccaaaaccagccctccgaagaagttgacc
gaagccgagctcctgaccctaatggacaaacacgggatagggacaaaagcaacagcccca
tcccatatagaaacaaacaagaagcgagggtatttcgagaccaaaggaaagacagtctcg
atccttgatacgggctttaccctgatggaagggctctccctgaccgtgccgatcctcatc
agaccggacatccgctcaaagatcgaagcccttatccaggaagtcgaagacgggaaaaaa
gagttcgaagctgccctcgacgagggtacagctctgataaaagagatgtatgcccagctt
gaagcaaacaaaaaggagctgacttcaagcattgcaggcacgatcaaggacgaagctgcc
ctcgaagacaagaaaaactatattgggacctgcaaggtttgcgggcacgtgctcaaaatt
gtgcagacggatacggggcgttttgtgggctgctcaggttaccctgactgcagaaactca
ttccctcttccgaaaacgggagccctgaatgtgctcaggagtaaggaatgcaaaaaggaa
ggagcagccgtcctgaaggtaggcaacaaatacaactgggctgttggcataggaccctgc
tttaaatgcgaccttgaaaaggaatgctaccctcctgaaaccgtgggaccctgccccgaa
tgtgacgggagcatgttcctgatctcttttaaagacagccgtttcctgggctgtacgaag
cgctgcgggtatacgcattcggtcccgaagaccggaaaacttaccctgcttgataaaaca
tgtgggacctgcggctggaagttgttcaggttaaaagaagaaggggacagcccggaagag
gatttctgcgtaaaccggcgctgtacggaaggcataaaatactggagaaaaacaggtccc
agaaatgagtccagaggtcaggcaaaggcttctggagattcggtatcgaggccggaagca
ggaagtactgcaagaagtactgcaagaagtacagcaagaccgacaccatgtaaagtttca
aaaggaccatcgattacaggcgagcggaaagaggacaggggtaagtaa
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