Methanosarcina lacustris: MSLAZ_2369
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Entry
MSLAZ_2369 CDS
T03822
Name
(GenBank) Endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
mls
Methanosarcina lacustris
Pathway
mls03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mls00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MSLAZ_2369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mls03400
]
MSLAZ_2369
Enzymes [BR:
mls01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
MSLAZ_2369
DNA repair and recombination proteins [BR:
mls03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
MSLAZ_2369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
DUF6005
Motif
Other DBs
NCBI-ProteinID:
AKB75630
UniProt:
A0A0E3WSX9
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All DBs
Position
complement(3080943..3081812)
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AA seq
289 aa
AA seq
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MWEFFKKEVLKNMSFEKLFFGTAGVPRSTKASTSTAGIERVRELGLDCMELEFVQGVRMR
EKGAGAVLETAERENIALSVHAPYYINLNSPEEEKLKASMERIYQAARIGSLCGAKSIVL
HAAFYQKSSKPATYENVSTALRELTEQLRGEGIPAVLRPETMGKRSQFGTLEEVLALSEE
IEGVMPCLDFSHMHAREGKENSYPEFTAILSKVENALGKEGLANMHMHVSGIEYGGNGEK
RHLPLKESDFNYPDLLKALKEFEVRGRVICESPILEEDALLLKKTYSEI
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
ttgtgggaattttttaaaaaagaagttttgaaaaacatgtcgtttgaaaaactttttttt
gggactgcaggggttcccagaagtacgaaagccagcaccagtactgcaggaattgagcgt
gtcagggaactggggctcgactgcatggaactggagttcgtgcagggagtacgcatgagg
gaaaaaggggctggagccgttctggaaaccgccgaaagagaaaacatagctctgagcgta
catgcaccttattatatcaaccttaactccccggaagaagaaaaattaaaagccagtatg
gaaaggatctaccaggctgcaaggataggcagtctctgcggagcaaagtccatcgtactg
cacgcagccttttaccagaagagcagcaagccagccacctatgaaaatgtctcaacagcc
ctccgggagcttacagagcagctccggggggaagggatacctgcagtccttcgtcctgag
accatgggcaagcgttcccagtttgggacccttgaagaagtgcttgccttaagcgaagaa
atcgaaggggttatgccctgcctggacttttcccacatgcacgcaagggaagggaaggaa
aactcctatcccgaatttacggcaatcctctcgaaagtagaaaatgcccttggaaaagaa
gggcttgcaaatatgcacatgcatgtttcgggaatcgaatatggagggaatggggaaaag
agacatctgccccttaaagaatcagactttaattatcctgatctattaaaagctcttaaa
gaattcgaagttcggggacgggttatttgcgaaagcccgatcctggaagaagacgcactt
ctgctaaagaagacttatagcgaaatataa
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