Methanosarcina lacustris: MSLAZ_2633
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Entry
MSLAZ_2633 CDS
T03822
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mls
Methanosarcina lacustris
Pathway
mls03410
Base excision repair
mls03430
Mismatch repair
mls03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mls00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MSLAZ_2633
03430 Mismatch repair
MSLAZ_2633
03440 Homologous recombination
MSLAZ_2633
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mls03400
]
MSLAZ_2633
DNA repair and recombination proteins [BR:
mls03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MSLAZ_2633
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MSLAZ_2633
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MSLAZ_2633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH_CID
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
AKB75894
UniProt:
A0A0E3S4C6
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All DBs
Position
3421057..3422457
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AA seq
466 aa
AA seq
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MTEMMEAFRKEAGKCAEEIRKHRSVQVVSHIDADGLTSAGIICTALERENIEYTARFVKQ
LDEKALDIIANENPEFVIFTDLGSGMCEHIKSRGINAVVSDHHQPQGTLELHLNPHLFGA
NGSYELSGSGTTYLLASALGKNIDLSPLAIVGAVGDMQHLKMGQLVGINREILEEGVRGE
HLEFKKDLTLFGKQTRPIYKLLQYSSDPYLPGLTGNEEACIEFLHSLNIHHSQDERWRRW
IELEVSEKQKIVSGLFQYCLKSGIPSYKIERLISEVYVLLNEREGTEMRDASEFSTLLNA
TARYDHADIGLAVCMGDRETAYEDAKKLLAEHRQNLVNGLMYVKENGITQLDNIQYFDAG
SQIKETIVGIIAGMSSTIVENRNLPIIAFAKTEGGIKVSARGTQDLIRRGVNLSEAMSTV
SAEVGGAGGGHDIAAGATIPENVKDEFARKLDLFIGEQLRRKANSR
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaatgatggaagcatttagaaaagaagcaggcaagtgtgccgaagagataaga
aaacacaggtcagtgcaggtagtatctcatattgatgcagacgggctgacttctgcaggg
attatctgcacagctcttgaacgggaaaatatagaatatacagcacgttttgtaaagcag
ctcgatgaaaaagcccttgacattatcgcaaacgaaaacccggagtttgtaatttttacg
gacctcggaagcgggatgtgcgaacatataaaatcccgcgggatcaatgctgttgtctca
gaccaccaccagccccagggcactcttgagttgcacctcaacccacacctttttggagca
aacggttcttacgaactgagcggttcgggaacaacttaccttctggcttcagcccttgga
aagaatatagacctttccccgcttgccatagtaggggctgtaggggatatgcagcacctg
aaaatggggcagcttgtagggattaacagggaaattctggaggaaggcgtaagaggagaa
cacctcgagttcaaaaaagacctgacccttttcggaaagcagacccgcccaatctacaaa
cttctgcagtattcttcggacccttaccttcccggacttaccggaaatgaagaagcttgc
atagaatttcttcattccctgaatattcaccacagccaagacgagcgctggagacgctgg
atagaacttgaggtttcggaaaaacagaaaattgtctcagggcttttccagtactgcctt
aaatcaggaataccgtcatacaagatcgagcgcctgataagcgaggtgtatgtccttctc
aatgaaagggaaggtacggaaatgagagatgcatcagagttttccactcttctcaatgct
actgcccggtatgaccatgctgacattggacttgcagtctgcatgggagacagggaaacc
gcctacgaagacgccaaaaaactgcttgctgaacacaggcaaaacctcgttaacgggctt
atgtacgtaaaagagaatgggatcacccagctcgataacattcagtactttgatgcaggt
tcgcagataaaggagaccattgtaggaataattgcaggcatgagttccacaatcgttgaa
aacaggaatctcccgattattgcctttgcaaaaacagagggaggcattaaggtatcagca
agagggacgcaggacctgatccgcagaggagtaaacctctctgaagcaatgtcaacggtc
tcggcagaagttggcggagcaggcggcggacacgatattgccgcaggggcaaccattcct
gagaacgtaaaagacgagtttgcccgaaaacttgaccttttcataggagaacagctccgc
cgaaaagcaaattcaagataa
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