Methanosarcina lacustris: MSLAZ_3120
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Entry
MSLAZ_3120 CDS
T03822
Name
(GenBank) Eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
mls
Methanosarcina lacustris
Pathway
mls03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mls00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MSLAZ_3120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mls03019
]
MSLAZ_3120
03012 Translation factors [BR:
mls03012
]
MSLAZ_3120
Messenger RNA biogenesis [BR:
mls03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
MSLAZ_3120
Translation factors [BR:
mls03012
]
Eukaryotic type
Release factors
MSLAZ_3120
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Zn_ribbon_LysW
HypA
DUF1759
Vps36-NZF-N
Zn_ribbon_TFIIB
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
AKB76381
UniProt:
A0A0E3S787
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Position
4007962..4009209
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AA seq
415 aa
AA seq
DB search
MTEQSAHDKYEFKKKLEGLRDKRGRSTELISIYLPPDKQIFDVTNQLKDEHGQAANIKSK
LTRTNVQGAIESLLSRLRYLDKVPENGIVYFTGAVDIGANKTSMESEVIVPPDPITVYKY
HCDSSFYLEPLDDMLKDKNTFGLLVLDRREATVGLLVGKRIQAFRNLTSTVPGKQRKGGQ
SAHRFQQLRLIAIHEFYKRIGDAASDIFMAVDHKDLKGVLIGGPSPTKEEFYAGEFLHHE
LLKKILGLFDTGYTDESGLSELVNAAEDKLKDLELMGEKNAVRAFFKELIADSGKIAYGE
AQVRANLEINSVDVLLLSEDLRAERVTTKCSVCGYENKWTRRWKPGEPAPTAGNCPKCGS
SLEVTDVTDIVDEFSELADKSNAKLIFVSTDFDEGSQLMNAFGGIAATLRYNTGI
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacaatccgcacatgacaagtatgaatttaaaaagaagcttgaaggcctcagg
gataagagaggaaggagcacggagcttatttccatttatcttcctcctgacaagcagatt
ttcgatgttacaaaccagttaaaagacgagcatgggcaagctgcaaacattaagtccaag
cttacgaggacgaatgtgcagggagctattgagtctctgctctcaaggctcagatatctg
gacaaagtacctgagaatgggatagtgtactttacaggagctgtggatatcggagccaac
aagacaagtatggaaagcgaggtaattgtccctcctgaccccatcactgtctacaagtac
cactgtgactcatctttctaccttgagcctcttgacgatatgcttaaggataagaacacc
ttcgggcttctggttcttgaccgcagggaagcaactgtcgggttgctggtaggaaagaga
atccaggctttccgcaacctgacctcgacagttcctggaaagcagaggaaaggaggtcag
agcgcccaccgtttccagcagctcaggctcattgcaattcatgagttctacaagaggata
ggagatgctgcaagtgatattttcatggctgtagaccacaaggacctcaaaggcgtcctg
ataggaggcccctctccgacaaaggaagagttctacgcaggtgagttcctgcaccacgag
ctcttaaagaaaatcctcgggctctttgatacaggatataccgatgaatccgggctttcc
gagcttgttaatgctgcagaggataaactcaaggaccttgagcttatgggagagaagaat
gccgtcagagcctttttcaaggaactgattgccgattcgggtaagatagcctatggagaa
gcccaggtcagggcaaacctcgagataaattcagtggacgtgctccttctttctgaagac
ctgcgtgcagaaagggtaactacgaaatgcagtgtctgcggatacgaaaataagtggaca
cggcgctggaaacccggagaacctgctcccacagccgggaactgtcccaaatgtggctct
tcccttgaggttacggatgttacggacattgtggacgagttctcagagcttgccgacaag
agtaatgcaaagttaatcttcgtatccactgactttgatgagggttcccagctcatgaat
gcctttggaggcatagctgcaaccctgaggtacaatactggaatctga
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