Flagellimonas lutaonensis: VC82_1271
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Entry
VC82_1271 CDS
T03884
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mlt
Flagellimonas lutaonensis
Pathway
mlt03410
Base excision repair
mlt03430
Mismatch repair
mlt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mlt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VC82_1271
03430 Mismatch repair
VC82_1271
03440 Homologous recombination
VC82_1271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mlt03400
]
VC82_1271
DNA repair and recombination proteins [BR:
mlt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
VC82_1271
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
VC82_1271
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
VC82_1271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
LsmAD
Motif
Other DBs
NCBI-ProteinID:
AKA34901
UniProt:
A0A0D5YSS3
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Position
complement(1354653..1356341)
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AA seq
562 aa
AA seq
DB search
MRWTIKPKPERSEVDRLSKELKVDGLVAHLLLQRGINNYGDAKKFFRPELSDLHDPFLMK
DMGAAVERIEKAITNNENILVYGDYDVDGTTAVALMYTFLSNCHENVATYIPDRYVEGYG
VSFQGVDFADDNGFSLIIALDCGVKAIEQVNYAKSKGIDFIICDHHRPGDRLPQAAAVLD
PKREDCEYPYKELCGCGVGFKLIQALAHKKAKTIDDLTPYLDLVATAIGADIVPITGENR
ILAFYGLQVINSNPRIGFRAIIDQIKKRTLTITDVVFIIAPRINAAGRIKHGQHAVNLLT
ETDYDQAKKFAEEIEQFNTDRRGLDQEITEEALQQIKDNKEEKRFTSVVYNEQWHKGVIG
IVASRLTETYYRPTLVFTKSGDKLAASARSVKGFDVYEALEGCADCIEQFGGHKYAAGLT
LLEEQFETFKQRFEKVVSETIDPLLLTPEINIDAQIELRQITPKLMRIIRQFAPFGPGNM
TPVFLARGVQDTGYAKGVGEDGKHLKLTLTQKGSKPIGAIGFNLGDKLEVVKNKNSFDIV
FSLDENEWNGQVSLQLKLRDIR
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
ttgcgctggacgatcaaaccgaaacctgaacggtcagaagttgaccgcctttccaaagaa
ctgaaagtcgatgggttggttgcgcatctgttgcttcagcggggaatcaacaattatggg
gatgctaaaaagttcttcagacctgaactttcagatctacacgacccttttttgatgaaa
gacatgggtgcggctgtggagcgcatcgaaaaggctatcaccaacaatgaaaatattttg
gtgtacggcgattatgatgttgacggcaccacggcagtagcccttatgtacactttcttg
agcaattgtcatgaaaacgtagccacgtatattcctgaccgttatgtcgaggggtatggg
gtttcttttcagggagttgattttgccgacgacaatggcttttcgctgatcattgccctt
gattgtggtgtcaaggccattgagcaggtcaactacgcgaagagcaagggaatagatttc
attatctgcgatcaccaccggcccggtgataggctgccgcaagctgcagcggtattggac
cccaaaagagaagactgtgagtatccgtacaaagagctttgtggttgtggtgtggggttc
aagctgatacaggcgttggcccataaaaaggcaaaaaccatcgatgacctaactccttac
cttgatttggtcgccacggctataggcgctgatattgttcccataacaggtgagaacagg
atcttggccttctacggacttcaggtcatcaattcaaatccgagaattgggtttcgggcc
atcatcgaccaaatcaaaaaacgtacattgaccattaccgatgtggtttttatcattgca
ccacgaataaatgccgctggcagaataaagcatggccagcatgccgtcaacctgctcacc
gaaacagattatgatcaggcaaaaaagtttgccgaagagatagaacagtttaatacagat
agaaggggtcttgaccaagaaatcaccgaagaggccttacagcaaattaaggacaataaa
gaagaaaaacggttcacttcagtggtctataacgagcaatggcacaagggggtcattggc
attgtggcttcgcggttgacagaaacctactataggcctaccttggtcttcaccaaaagt
ggtgacaaacttgctgcatcggcacgatctgtgaaaggattcgatgtttatgaggccctg
gagggttgcgcagattgtatagagcagttcgggggccataagtacgctgctgggctcacc
ttgctcgaagaacaatttgagacctttaagcaacggttcgaaaaagtggtctctgaaacc
atagaccccctgttgttgaccccagaaatcaatatcgatgcccaaatagaactacgacag
attacaccaaaattgatgcggatcatccgccaatttgcccctttcggccccgggaacatg
acacccgtttttttggccaggggcgttcaagatacgggctatgcaaaaggcgtgggtgaa
gatggcaaacacctgaaactgacactaacccaaaaagggtcgaagcccattggggccatc
ggtttcaatcttggggataaactggaagtggtgaagaacaaaaacagctttgacatagtt
ttttctttggacgaaaacgagtggaatggtcaggtaagtctccaattgaaactccgcgat
atacgttga
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