Flagellimonas lutaonensis: VC82_2574
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Entry
VC82_2574 CDS
T03884
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mlt
Flagellimonas lutaonensis
Pathway
mlt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mlt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VC82_2574
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlt03019
]
VC82_2574
03400 DNA repair and recombination proteins [BR:
mlt03400
]
VC82_2574
Enzymes [BR:
mlt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VC82_2574
Messenger RNA biogenesis [BR:
mlt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
VC82_2574
DNA repair and recombination proteins [BR:
mlt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
VC82_2574
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Cas3-like_C_2
HTH_5
Guanylate_cyc_2
HTH_11
HTH_Mga
Motif
Other DBs
NCBI-ProteinID:
AKA36138
UniProt:
A0A0D5YWA5
LinkDB
All DBs
Position
complement(2762669..2764570)
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AA seq
633 aa
AA seq
DB search
MQKNPIEILKQYWGHSSFRGSQEKVINALLQQNDVLALMPTGGGKSICYQVPALSMDGIC
VVVSPLVSLIQDQVQRLKRLGIKAIALTGSLKPEELIEQFDNCLYGGYKFLYLSPERLLQ
QLVRDRIKEMNVCLIAIDEAHCISQWGHDFRPAYLQCHELKRLAPQAPVIALTATPTATV
AKDIVELLELDNPITFKDSLARENITFFVRDVEDKRYHLLQLVGENDQSGIVYVNTRRAT
IELSTFLKSKGCRTDYFHGGLLHHEKKKKLEDWLNNETKIMVATSAFGMGVDKADVRFVV
HHHIPDSLESYFQEVGRAGRDDLPAKAVLLTNAHDRLQAKKQFLGSQPDVLFIKLLYKKL
NAYFQIAYGEGDGQTFTFLFNEFCQQYQLNTLLAYNGLRILDQHSVIAWSNASRQTSTVQ
FLAKKHELFKYLDKNPSLEGTIKSILRTYGGIFDYETPINTSLIAKKNSLTEDKVDSLLQ
KLHNDGILAYNASKSDMELTFLVPREDDKVINVFAHKLKDLNKNRQRRFADMLAYIDNKE
KCRAQFLLEYFGQTATNPCGQCDICQKDQRRPTQSLAKAKKEVLRHLKQRSLSSKELANH
LNYSEKIILESIQELLDEEEIMINTRNQYDIAK
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaaaaaatcccattgaaatattaaagcaatactggggccatagcagtttcagggga
tcacaggaaaaggtcatcaacgcgctgcttcaacagaatgatgttttggccctgatgccc
accgggggaggcaaatcgatttgctaccaggtaccggccctgtcgatggatggtatctgc
gtagtggtttcaccattggtatcgctcatacaagaccaggtacaacgactcaaaagactg
ggcataaaggccattgccctaacaggaagcttgaaaccggaagaactgatagagcagttc
gacaactgtctgtatgggggctataagttcttgtacctgtcgcccgaacgattgctacag
cagctggtgcgtgaccgtatcaaagaaatgaacgtctgtttgatcgcgattgacgaggca
cactgcatctctcaatggggccatgatttcagacctgcctacctacaatgccatgaattg
aaaagattggccccccaagccccggtaatagcccttaccgctaccccaaccgcaactgtg
gccaaagacatcgttgaacttcttgagctcgataatcccatcaccttcaaagattcgttg
gccagggagaatatcaccttttttgttagggatgtggaagacaaaagatatcaccttcta
caattggtgggcgaaaatgaccaaagtggaatagtttatgtgaacaccagaagggcaacg
atcgaattgtcaacttttcttaaaagtaagggctgtcgtacggattacttccacggtgga
cttttacaccacgaaaagaaaaagaaattagaagactggttaaacaacgagaccaaaata
atggttgccaccagtgcattcggcatgggggtcgacaaggccgatgttaggtttgttgta
caccaccatatacccgatagtcttgagagctactttcaagaagtgggccgggcaggccgc
gacgacctgcccgctaaagccgtgctattgacgaatgcacatgataggctacaagccaag
aaacagtttttggggagccaacccgatgttctgtttatcaagttgctctataaaaaactg
aatgcgtattttcaaatagcttacggtgagggtgatggacagacctttacatttttgttc
aacgaattctgccaacaatatcagttgaatacgcttttggcctataacggtcttagaatc
ttggaccaacactctgtcatcgcatggtccaatgcctccagacaaacatccacggtgcaa
tttttggcaaaaaaacatgagttgttcaaatacctcgacaaaaatccctctttggaaggg
accatcaaatcgatattgcgcacatatgggggcatttttgattatgaaacccccatcaac
acatcgctcatcgccaaaaaaaattccctcacagaagataaggttgatagcctattgcaa
aaattgcacaatgatggcattctggcctacaatgcctcaaaaagtgatatggaactgacc
tttctcgtgccacgggaagatgacaaggttatcaatgtctttgcccacaaacttaaagat
ctgaacaagaacaggcaacgcaggtttgctgatatgctcgcctatatagacaataaagaa
aaatgcagggcccagtttttactcgaatatttcggccaaacagcgacaaacccatgtggt
cagtgcgatatttgtcaaaaagaccaaagacgaccgacccaaagtttggcgaaggcgaaa
aaagaggtattaaggcatttaaaacaacggtccttatcttccaaagaattggcaaaccat
ctaaattacagcgaaaaaattatcttggaatccattcaagaattgctcgatgaagaagaa
ataatgataaacactagaaaccagtatgacatcgcaaaataa
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