Flagellimonas lutaonensis: VC82_2906
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Entry
VC82_2906 CDS
T03884
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mlt
Flagellimonas lutaonensis
Pathway
mlt03420
Nucleotide excision repair
mlt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mlt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
VC82_2906
03430 Mismatch repair
VC82_2906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mlt03400
]
VC82_2906
Enzymes [BR:
mlt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VC82_2906
DNA repair and recombination proteins [BR:
mlt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VC82_2906
MMR (mismatch excision repair)
Other MMR factors
VC82_2906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
nSTAND3
ResIII
Motif
Other DBs
NCBI-ProteinID:
AKA36451
UniProt:
A0A0D5YX17
LinkDB
All DBs
Position
complement(3111013..3113337)
Genome browser
AA seq
774 aa
AA seq
DB search
MNYLNELNDAQKAPVLHKDGALMVIAGAGSGKTRVLTYRIAYLMQQGVDPFNILALTFTN
KAAREMKKRIAYIVGESEAKYLWMGTFHSIFARLLRYDGDKLGFPSNFTIYDTQDSQRLI
ASIIKEMGLDKDIYKYKQIQNRISSYKNSLITVKAYFQNPELMEADAMAKRPRLGEIYQN
YVERCFKAGAMDFDDLLLRTNELLTRFPEVLMKYQERFKYILVDEYQDTNHSQYLIVRAL
ADRYQNICVVGDDAQSIYSFRGANISNILNFQRDYDDVAVYRLEQNYRSTKNIVNAANSI
IAKNKNQLEKVVWTANDEGNKIKIHRSPTDAEEGRYVASSIFENKMQHQLKNGDFAVLYR
TNSQSRAIEDALRKRDIPYRIYGGLSFYQRKEIKDVLAYLRLIINPKDEEALKRVINFPA
RGIGQTTIDKLVVAANHYGRSIFEVMENLDKLDLNINSGTKNKLRNFVTMIKSFQIMNEQ
TDAFTLAEHVAKKSGLLMEFKKDGTPEGIGRMENIEELLNGIKDFVEGQKELAEAKGDLT
EFLEDVALATDLDKDIGDDDRVALMTIHLAKGLEFPYVYIVGMEEDLFPSAMSMNTRSEL
EEERRLFYVALTRAEKQAHLTYTQNRYRWGKLIDAEPSRFLEEIEEQYVENLTPINDGYR
YKSMINADIFGEVDKGKLRQVKPKNGTPPKVVGPNENQLRRLRKIKPELSTPTKSDVVID
PNLAEGALVNHTRFGKGKVLKIEGVGNDKKAEIQFEKGDVKKLLLRFAKLEVLS
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgaactatctgaacgaactgaacgatgcacaaaaggcacctgtgttgcacaaagacggg
gccttgatggtgattgccggtgcgggatcgggaaagacacgggtattgacctatcgcatt
gcctatttgatgcaacaaggcgttgaccccttcaatattttggcattgacctttaccaac
aaagcggcacgcgaaatgaaaaagcgaattgcctacattgtgggcgaatcggaggccaaa
tatctttggatgggcacctttcactctatttttgcccgtcttctccggtatgatggcgat
aaacttggttttccgagcaatttcactatttacgacacgcaggactcacagcggctcatt
gcatccatcatcaaggaaatgggcttggacaaggacatatacaagtacaagcagatacag
aaccgcatctcgtcttacaaaaacagtctgataacggtcaaggcctattttcagaatcct
gaattgatggaggccgatgccatggccaagcgcccacgattgggcgaaatttaccaaaac
tatgtggagcgttgctttaaggctggggccatggactttgacgatctgttgctgcgcacc
aatgaactgctgacccgttttccagaggttttaatgaagtaccaagaacggttcaaatac
atcttggtagacgagtaccaagacaccaaccactcgcaatatctcattgtgcgggccctg
gccgaccgctaccagaacatttgcgtggtgggcgatgatgcccagagtatctattcgttc
agaggtgccaacatcagcaacatcctcaactttcaacgtgattatgacgatgtggccgtc
taccgtttagagcagaattaccgctctaccaaaaatattgtaaatgccgccaactccatt
atcgccaaaaacaagaaccaattggagaaagtagtctggacggccaatgacgagggcaac
aaaataaagatacaccgaagccccacagatgcagaagaggggcgctatgtggcaagctcc
atttttgagaataaaatgcagcaccaactcaagaatggtgattttgcggtgctctacaga
accaactctcagtcgagggccatcgaagatgcgcttcgcaagcgtgatattccctatcgt
atttacgggggactttccttttaccaacgcaaggaaatcaaagatgtgctcgcctacctt
cgcctgatcatcaatcctaaagacgaagaggccctgaaaagggtcatcaatttcccggca
aggggtatcgggcaaactaccattgataaattggtggtggcggccaaccattatggccgt
tcgatatttgaggtgatggagaatttagacaagctcgacttgaacattaattcaggcacc
aagaacaagcttcggaattttgtgaccatgatcaaaagctttcagatcatgaacgaacag
accgatgcctttacacttgctgaacatgtggccaaaaagtcgggtcttttgatggagttc
aaaaaagatggcacgcccgaaggcataggccgaatggagaatatcgaagagttgctcaat
ggtatcaaagactttgtggagggccaaaaagagctggccgaggccaaaggcgacctgaca
gagttcttggaagatgtggcgctggccaccgatctagacaaggatatcggcgatgatgac
cgcgttgcgctcatgaccatacatttggccaagggattggagtttccgtatgtgtatatc
gtgggaatggaagaagatctgtttccctcggccatgagcatgaacacgcgaagtgagctc
gaagaagaacggaggctattctacgtagccttgacccgtgccgaaaaacaagcccatctg
acctatacccagaaccgttatcgttggggcaagctgatcgatgccgaacccagtcgtttt
ttggaagaaatcgaagaacagtatgttgaaaacctcactccgataaatgatggataccgt
tacaaatcgatgatcaacgccgatatttttggtgaggtcgataagggcaagttgcggcag
gtaaaacctaagaacggaacccctccaaaagtggtcggaccaaatgaaaatcagttgaga
aggctaaggaaaataaagcccgaattgtcgacacccacaaaaagcgatgttgtaatcgac
cccaacctcgccgaaggggccctggtgaaccacacccgttttggcaagggaaaagtcctg
aaaattgagggagtgggcaatgacaaaaaggccgagatccagtttgaaaaaggcgatgta
aaaaaactgcttttgcgctttgccaaactcgaggtattgtcataa
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